Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02175 ATGCTGCTGCTTATTTCACTCTCTCTACTCCGAAGAAAGAAACCATACCCACCGGGCCCAAGAGGCCTACCCATAATAGGCAACATGAACATTATGGACCAACTCACACACAGAGGCTTGGCGAATCTAGCGAAGCAATACGGCGGCGTTTTGCACCTCCGCATGGGGCTCATCCACATGGTGGCGATTTCAAACGCGGAAGCGGCGCGTGAAGTGCTCCAAGTCCAAGACAACATCTTCTCCAACCGCCCCGCGACCATCGCCATCAGCTACCTCACCTACGACCGCGCCGACATGTCGTTCGCGCCCTACGGCCCCACGTGGCGCCGGATGCGCAAGCTCTGCGTCACGAAGCTCCTCAGCCGCCACCGCACTGCGTCGTGGAACTCCGTCAGAGACCAAATTCGCACCGTCGTTTCTACCTTAGGGTCCCACACTGGCCAGAACGTGAACGTCAGAGACGTGCTTTTCAACCTAACCAAGAGCATCGTTTACCGCGCCGCGTTTGGGTCGCGCTTGGAGGAAGGGGAGGGCGAGTTCGTTGCGATTCTTCAGGAGTTCTCGAAACTGTTTGGGGCTTTCAATGTTGCTGACTTTTTTCCCTTCCTCGCGTGGGTTGACCCCCAAGGGTTCAACCGCAGGCTCGTTCAAGCTCGTGCCACGTTGGACGGTTTCATCGACAGGATTATTGAGGAACATGTGCGGAAGAAGCGCGACCACGGCGGTGGCTGTCGCGAAGAAAAGGACATTGTTGATGAGATGTTGGCGCTTGACGGTGATGAGGTTAAATTGAATGAATCGGAGGATGGGCATGGCTCTGTCAAATTGACGAAGGATAATATCCGCGGCCTTATCATGGACGTGATGTTCGGAGGAACAGATGCAGTGGCAGTGGCGATGGAGTGGGTAATGGCGGAGCTAATGAGAAACCCTAACGATCTGAAGCGCGTGCAGCAAGAACTCGCAGACGTGGTGGGCCTGCACCGCCACGTGGAGGATTCCGACATCGAGCGCCTTACCCACCTCAAATGCGCCATCAAGGAGACGCTGCGGCTGCACCCGCCGATCCCGCTGCTCCTCCACGAGACGGCGGAGGACGCAGCAGTGGCCGGCCACTTCGTCCCGAGGAAGTCGCGCGTGCTGGTGAACGCGTGGGCCATCGGCAGGGACGGCGCGTGCTGGGAGGACCCGCACGCTTTCAGGCCCTCCAGGTTCCTGAGCCCGCACGTGCCGGATTTTAGAGGGTGCAGCTTCGAGTTCGTTCCGTTCGGGTCGGGTCGGAGGTCCTGCCCCGGAATGCAACTGGGTATTTACATAATGGAGCTGGCGGTGGCGCACTTGCTTCACTGCTTCACGTGGGAGTTACCCGATGGGATGAAGGCGAGTGAGATGGACATGAGTGACGTGTTTGGACTCACCGCGCCCAGGGCGAGTCAACTCGTTGCTGTACCTAGGAAGCGCGTGATGTGCCCTCTCTAA 1479 0.5822 MLLLISLSLLRRKKPYPPGPRGLPIIGNMNIMDQLTHRGLANLAKQYGGVLHLRMGLIHMVAISNAEAAREVLQVQDNIFSNRPATIAISYLTYDRADMSFAPYGPTWRRMRKLCVTKLLSRHRTASWNSVRDQIRTVVSTLGSHTGQNVNVRDVLFNLTKSIVYRAAFGSRLEEGEGEFVAILQEFSKLFGAFNVADFFPFLAWVDPQGFNRRLVQARATLDGFIDRIIEEHVRKKRDHGGGCREEKDIVDEMLALDGDEVKLNESEDGHGSVKLTKDNIRGLIMDVMFGGTDAVAVAMEWVMAELMRNPNDLKRVQQELADVVGLHRHVEDSDIERLTHLKCAIKETLRLHPPIPLLLHETAEDAAVAGHFVPRKSRVLVNAWAIGRDGACWEDPHAFRPSRFLSPHVPDFRGCSFEFVPFGSGRRSCPGMQLGIYIMELAVAHLLHCFTWELPDGMKASEMDMSDVFGLTAPRASQLVAVPRKRVMCPL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02175 492 PRINTS E-class P450 group I signature 430 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS E-class P450 group I signature 44 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS E-class P450 group I signature 68 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS E-class P450 group I signature 420 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS E-class P450 group I signature 159 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS E-class P450 group I signature 343 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS E-class P450 group I signature 383 407 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PANTHER CYTOCHROME P450 84A1-RELATED 7 492 - -
Pumo4g02175 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 423 432 IPR017972 GO:0005506|GO:0016705
Pumo4g02175 492 PRINTS P450 superfamily signature 421 430 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 PRINTS P450 superfamily signature 344 355 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 Pfam Cytochrome P450 17 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 FunFam Cytochrome P450 84A1 9 486 - -
Pumo4g02175 492 CDD CYP71-like 46 480 - -
Pumo4g02175 492 Gene3D Cytochrome P450 9 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02175 492 SUPERFAMILY Cytochrome P450 17 487 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02175 Pumo-Chr4 31841586 31847186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02175 24 492 Monolignol Biosynthesis Gene Families AT4G36220 64.905 0.0 667
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02175 K09755 - gmx:100807448 722.62