Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02159 ATGCAACCAAGTTTGGAAACTTCTCTTCAACCATATTTTGTATACTTTGAAGTGATATTGAAAGAAGCAACAATGGCCAATTCCATGAGCTTTCTCCTGCTTCTTTCTTTACTAGCCTTTGCTCCCTTGTGCCTCTGTAACAACGAACTCAACCCTCAGTTTTATGACAATTCATGCCCTCGAGCTCAGCAAATTGTCAAGTCCATCCTTACCGCGTATTTTATAGTGCAACCCGGATATGCACCTTCAATTCTCAGGCTCCATTTCCATGATTGTTTTGTCGGGGGTTGTGATGCTTCATTGTTGTTAGATAACAGTACAAGCATCGTCAGTGAGAAGGAATCAAATCCTAACCGTGATTCAATTAGAGGATTTATAGTCATTGATGCAATTAAACTCGCACTAGAGAGAGAATGCCCTTCTACAGTGTCTTGTGCTGACATCTTGACTCTAGCTGCAAGAGATTCAGTTGTTCTTACTGGTGGACCAAGCTGGGAAGTACCTTTAGGCAGAAGGGACTCTCGAAATGCAAGCATAAGTGGCTCCAACAACAACATTCCAGCCCCAAACGGCACATTCCAGACCCTCCTAACAAAATTCGAGGATCAGGGGCTTAACCGTTCTGATCTAGTTGCTCTGTCTGGGGCCCATACTATAGGAATTGCCAGGTGCACCAACTTCAGGCAAAGACTCTATAACCAAAGTGGCAATGGTGAGCCAGATTCCACTCTTGACCAAAACTATGCTGCTTTATTGCGTGCTACGTGTCCAAGAACTTGGGGTGACCAGAATCCGTTCTTCCTAGACTACGCCACCCCATTGCAATTTGACAACAGGTACTTCAAGAACCTGTTGGAGAACAAGGGTCTATTAAACTCTGATCAAGTCCTCTTCACAATGAACCAAGAATCAGCTGAGTTAGTGAGGTTGTATGCTGAAAGAAACGACATTTTCTTTGAACAATTCGCCAAGTCCATGATCAAGATGGGAAACATATCTCCTTTGACAAATTCAAAGCAACCCCGATTGGCAGCTTCAATTCTTAGGCTTCATTTCCATGATTGTTTTGTCAAGGGTTGTGATGCTTCATTGTTGTTAGATAGCAGTGAAAGCATCATCAGTGAGAAGGGATCAAATCCCAACCGTAATTCAGCTAGAGGATTTGAAGTCATTGATGCAATTAAAGCCGGACTAGAGAGAGAATGCCCTTCTACAGTGTCTTGTGCTGACATCTTGACTCTAGCGGCAAGGGATTCAGTTGTTCTTACTGGTGGACCAAGCTGGGAAGTACCTTTGGGCAGAAGGGACTCTCTAGGTGCAAGCATAAGTGGCTCCAACAACAACATTCCAGCTCCAAACAACACATTCCAGACCATTCTAACTAAATTCAAGCTTCAGGGGCTTGACCTTGTTGATCTAGTTGCTCTATCTGGGGGCCATACTATAGGAAATGCCAGGTGCACCACCTTCAGGCAAAGACTCTATAACCAAAGTGGCAATGGCGAGCCAGATTCCACTCTTGACCAATACTATGCTGCCACATTGCGTTCTAAGTGTCCAAGATCTGGGGGTGACCAAAATCTGTTCTTCCTAGACTATGCTACCCCATATAAATTTGACAACAGCTACTTCAAGAACCTGTTGGAGAACAAGGGTCTCTTAAGTTCTGATCAAGTCCTCTTCACAATGAACCAAGAATCAGCTGAACTAGTGAAGTTGTATGCTGAAAGAAACGACATTTTCTTTGAACAATTCGCCAAGTCCATGATCAAGATGGGAAACATATCTCCTTTGACAAATTCAAGGGGAGAGATCAGAGAGAACTGCAGGAGGATTAACGCTTGA 1845 0.4369 MQPSLETSLQPYFVYFEVILKEATMANSMSFLLLLSLLAFAPLCLCNNELNPQFYDNSCPRAQQIVKSILTAYFIVQPGYAPSILRLHFHDCFVGGCDASLLLDNSTSIVSEKESNPNRDSIRGFIVIDAIKLALERECPSTVSCADILTLAARDSVVLTGGPSWEVPLGRRDSRNASISGSNNNIPAPNGTFQTLLTKFEDQGLNRSDLVALSGAHTIGIARCTNFRQRLYNQSGNGEPDSTLDQNYAALLRATCPRTWGDQNPFFLDYATPLQFDNRYFKNLLENKGLLNSDQVLFTMNQESAELVRLYAERNDIFFEQFAKSMIKMGNISPLTNSKQPRLAASILRLHFHDCFVKGCDASLLLDSSESIISEKGSNPNRNSARGFEVIDAIKAGLERECPSTVSCADILTLAARDSVVLTGGPSWEVPLGRRDSLGASISGSNNNIPAPNNTFQTILTKFKLQGLDLVDLVALSGGHTIGNARCTTFRQRLYNQSGNGEPDSTLDQYYAATLRSKCPRSGGDQNLFFLDYATPYKFDNSYFKNLLENKGLLSSDQVLFTMNQESAELVKLYAERNDIFFEQFAKSMIKMGNISPLTNSRGEIRENCRRINA 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02159 614 CDD secretory_peroxidase 338 612 IPR033905 GO:0004601|GO:0042744
Pumo4g02159 614 FunFam Peroxidase 187 329 - -
Pumo4g02159 614 PRINTS Plant peroxidase signature 324 337 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Plant peroxidase signature 208 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Plant peroxidase signature 123 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Plant peroxidase signature 161 176 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Plant peroxidase signature 142 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Plant peroxidase signature 267 282 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Plant peroxidase signature 283 300 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 SUPERFAMILY Heme-dependent peroxidases 50 340 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 ProSiteProfiles Plant heme peroxidase family profile. 49 613 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 FunFam Peroxidase 53 195 - -
Pumo4g02159 614 ProSitePatterns Peroxidases proximal heme-ligand signature. 472 482 IPR019793 -
Pumo4g02159 614 PRINTS Haem peroxidase superfamily signature 472 487 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Haem peroxidase superfamily signature 532 547 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Haem peroxidase superfamily signature 406 423 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Haem peroxidase superfamily signature 344 358 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 PRINTS Haem peroxidase superfamily signature 424 436 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601
Pumo4g02159 614 Gene3D - 54 338 - -
Pumo4g02159 614 SUPERFAMILY Heme-dependent peroxidases 340 613 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 Pfam Peroxidase 339 576 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 Pfam Peroxidase 68 313 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 FunFam Peroxidase 450 592 - -
Pumo4g02159 614 Gene3D Peroxidase, domain 2 187 330 - -
Pumo4g02159 614 Gene3D Peroxidase, domain 2 450 593 - -
Pumo4g02159 614 ProSitePatterns Peroxidases proximal heme-ligand signature. 209 219 IPR019793 -
Pumo4g02159 614 PANTHER PEROXIDASE 72-RELATED 338 611 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02159 614 ProSitePatterns Peroxidases active site signature. 344 355 IPR019794 GO:0004601
Pumo4g02159 614 Gene3D - 339 613 - -
Pumo4g02159 614 CDD secretory_peroxidase 49 336 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02159 Pumo-Chr4 31337827 31367795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02159 341 613 Peroxidase AT5G66390 78.755 2.86e-161 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02159 K00430 - gmx:100811204 586.645