Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02120 ATGGCATCATCATGGACTCCAAGGCAGAACAAATTGTTTGAACAAGCCCTGGCTTTATATGACAGGGAAACCCCTGACAGATGGCAGAATGTGGCCAATGTGGTGGGAAGATCAGTAGAGGAAGTTAAAAGGCACTATGAGATCCTCAAAGAAGATGTCAGACGCATTGAACATGGCCAAGTTCCTTTTCCTCGTTACAAAACCAACACCAACACCAACAACTAA 225 0.4444 MASSWTPRQNKLFEQALALYDRETPDRWQNVANVVGRSVEEVKRHYEILKEDVRRIEHGQVPFPRYKTNTNTNN 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02120 74 FunFam Transcription factor SRM1 1 63 - -
Pumo4g02120 74 CDD SANT 4 50 IPR001005 -
Pumo4g02120 74 Gene3D - 2 63 - -
Pumo4g02120 74 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 3 72 IPR044636 GO:0003700
Pumo4g02120 74 SMART sant 1 52 IPR001005 -
Pumo4g02120 74 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Pumo4g02120 74 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02120 Pumo-Chr4 30264160 30265553 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pumo4g02120 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02120 - - lja:Lj4g3v0973380.1 144.05