Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02103 ATGTCAGACTCCTCACACCTGATGATCACTTTCTGTTTTCTTTCTTCCATCCTTGCTCTTATTCTCATCAGCTTCATTTTCACCAAAAGAAACAAACCAACCCTTAATCTCCCCCCTGGCCAAATGGGGTGGCCCCTTCTTGGGGAAACCATAGGGTTTTTGAAGCCTTACCCTGCTGTTACACTAGGACAATTTATGGAGAACCACATAGCAAGGTATGGTACAATTTACAAGTCAAACTTGTTTGGGGGGCCAGCCATAGTCTCAGCAGATGCAGGGCTGAATAGGTTCATATTGCAGAACGAAGGGAAGTTGTTTGAGACCAGCTATCCTAAGAGCATTGGGGGAATACTTGGGAAATGGTCCATGCTGGTCTTAGTAGGGGACATGCATAGGGACATGAGGAACATATCACTCAACTTTCTCAGCTATGCCAGGCTCCGAACACATCTTGTCAAAGAGGTCCATAGGCATGCCCTTCTAGTTCTCACCTCCTGGAAGCAAAATTCTACATTCTCAGCTCAAGAAGAAGCCAAAAGGTTCACCTTCAATTTCATGGCGAAACATATCATGAGCCTGGATCCTGGGAATCTAGAGACAGAACAATTGAAGACAGAATATGTCTCTTTCATGAAGGGTGTTGTGTCCCCTGCGCCTTTGAATTTGCCCGGAACAGCATACCGGAAAGCATTAAAGTCTAGGTCCACCATACTGAAGATCATAGAGGCCAAAATGGAAGGGAGAGCCATGAGGATCCAAAAGGGTAACGAAAGTTTGGAGGAAGATAATGATCTTCTAAATTGGGTTTTGGCGCACACAAATCTTTCAACCGAGCAAATACTTGACTTGATATTGAGCTTGCTTTTTGCTGGCCATGAAACCTCATCGGTAGCCATAGCTCTAGCTATTTACTTCTTGCCGGGGTGTCCTCGAGCTATGCAACAATTAAGGGAAGAACACGTGGAAATAGTCACTTCCAAGAAGCAGACAGGGGAGGTTGAATTGACTTGGGATGATTACAAAAGAATGGAGTTTACTCACTGTGTTGTGAACGAAACACTTCGACTAGGAAATGTTGTGAGGTTTCTCCACAGGAAGGCTATTAAGGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTAATTTCAGCTGTGCATTTGGATCCTTCACTTTTTGACAAACCTCAGCAATTCAATCCATGGAGATGGCAGGGCAATAATAAAAGTGGAAGTTGCCAAAACGCGAGCAATAACAACTTCATGCCGTTTGGAGGAGGATCAAGGTTGTGTGCAGGATCAGAGTTAGCCAAACTTGAAATGGCTGTGTTCATCCACCATCTCATCCTCAACTACAACTGGGAACTTGTTGATAAGGATCAACCTTTTGTATACCCTTATGTGGATTTCCCCAAAGGTCTACCCATCAAAGTTCAAACCCACTCTTCCACATGA 1470 0.4435 MSDSSHLMITFCFLSSILALILISFIFTKRNKPTLNLPPGQMGWPLLGETIGFLKPYPAVTLGQFMENHIARYGTIYKSNLFGGPAIVSADAGLNRFILQNEGKLFETSYPKSIGGILGKWSMLVLVGDMHRDMRNISLNFLSYARLRTHLVKEVHRHALLVLTSWKQNSTFSAQEEAKRFTFNFMAKHIMSLDPGNLETEQLKTEYVSFMKGVVSPAPLNLPGTAYRKALKSRSTILKIIEAKMEGRAMRIQKGNESLEEDNDLLNWVLAHTNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPGCPRAMQQLREEHVEIVTSKKQTGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKAIKDVRYKGYDIPCGWKVLPVISAVHLDPSLFDKPQQFNPWRWQGNNKSGSCQNASNNNFMPFGGGSRLCAGSELAKLEMAVFIHHLILNYNWELVDKDQPFVYPYVDFPKGLPIKVQTHSST 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02103 489 PANTHER CYTOCHROME P450 26 33 467 - -
Pumo4g02103 489 SUPERFAMILY Cytochrome P450 35 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 CDD CYP90-like 69 483 - -
Pumo4g02103 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Pumo4g02103 489 FunFam Cytochrome P450 90B1 27 485 - -
Pumo4g02103 489 Pfam Cytochrome P450 38 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 Gene3D Cytochrome P450 26 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS E-class P450 group I signature 347 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g02103 489 PRINTS P450 superfamily signature 348 359 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02103 Pumo-Chr4 29980116 29988305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02103 29 414 Cytochrome P450 AT3G50660 71.990 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02103 K09587 - gmx:100800210 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02103 4 29980116 29988305 Pumo4g02103 4 29980116 29988305 ECH
Pumo8g01842 8 54646687 54651416 Pumo4g02103 4 29980116 29988305 PCT