Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02093 ATGAGAGTTCCCTCATCCCCACAGCCCCACAACAACAACCATTCTTCCACCCCAAACCTCGTCCTTCACACAAACAATCCAACAACAACCTTCACCTACGAACCCACCTCGGTGCTCGATCTTTGCCGCAGCCCCAGCCCCGAAAAGAAACCCTCCTCCGTTGTCCCCAAAACAGAACCCCAACACAACAACAACCTAGACCTGGACGAGCATGTCTTGCCCAATTCGGATTGGTGGGAGTCCATCATGAAGGACTTAGCCTTACCCGAAGACTCTCCCACCCCACTTTTGAAGGCTAACAACAACATCAATCCATGCATCCCTGATTTCCCTCCTTCTCAGGACCCACCCTTTGATCACCCCCCAGACTTCACCTCTCTTTCAGAAATTTACAACCAAAACCTTTCCTATAACTACCCTACCAACACTCTAGACCATAATTCCTTTCACGACCTCAACCACCACCACCACCACAGCAACAACAACAACAATTGGGACTTCATCGAAGAGCTCATCCGCGCCGCCGACTGCTTCGACAGCACCCACTTCCAGCTCGCTCAAGCCATACTCGAGCGCCTCAATAACCGCCTCATTCGCTCTCCCATGGGCAAGCCGCTCCACCGAGCCGCGTTTCACTTTAAGGATGCTCTCCTGTCCATTCTCTCCTGTTCGAACCGGACCGGTTCCAACCGCCTCTCCTCCATGGCGGAGATTGTCCAAACCATCAAAACTTACAAGGCCTTTTCTGGAATTTCCCCGATCCCAATGTTCTCTATCTTTACCACCAATCAAGCCCTACTTGAAACCCTAAATGGATCCTCCTTCGTCCACGTGATTGATTTCGAGATTGGATTAGGAATCCAATACGCTTCTCTCATGAAGGAGATTGCGGAGAAGGCCGCCGGAGCCGCAGCCTCGCCGTTACTCCGCATCACCGCCGTCGTGCCGGAGGAGTACGCCGTCGAGAACCGCCTCGTCCGCGAGAATCTCAACCAGTTCGCGCACGACCTCGGCATCCGCGCGCAGGTGGAGTTCGTGCCGCTTCGGACCTTCGAGACGGTATCGTTCAAGGCGGTGAGGTTCCTCGACGGCGAGAAGATCGCGGTGCTGCTCTCGCCGGCGATCTTCTGCCGCCTCGGAATAAGCTGCGGCAGCGTTGGCGCGTTCCTCGCCGACGTGAGGCGGATGGCTCCAGGAGTGGTGGTGTTCGTGGACGGCGAGGGGTGGACGGAGGCCGCGGCGGCGGCGTCGTTCCGGCGCGGCGTGGTCAGCAGTCTGGAGTTTTATTCCATGATGCTGGAGTCGCTGGACGCGTCGGTGGCGGCGGGGGGAGGCGGCGAGTGGGTGAGGAGGATCGAGATGCTGCTGCTGCGGCCGAAGATCTTCGCGGCGGTGGAGGGCGCGCGGCGGAGGACTCAGCCGTGGAGGGAGGCGTTTTACGGCGCCGGAATGAGGCCGGTGCAGTTGAGCCAGTTCGCGGATTATCAGGCAGAGTGTTTGCTTGCGAAGGTGCAAATCAGAGGCTTCCACGTGGACAAACGACATGCTGAGTTGGTGCTTTGCTGGCACGAACGAGCCATGGTTACCACGTCAGCATGGCGGTGTTAG 1608 0.5752 MRVPSSPQPHNNNHSSTPNLVLHTNNPTTTFTYEPTSVLDLCRSPSPEKKPSSVVPKTEPQHNNNLDLDEHVLPNSDWWESIMKDLALPEDSPTPLLKANNNINPCIPDFPPSQDPPFDHPPDFTSLSEIYNQNLSYNYPTNTLDHNSFHDLNHHHHHSNNNNNWDFIEELIRAADCFDSTHFQLAQAILERLNNRLIRSPMGKPLHRAAFHFKDALLSILSCSNRTGSNRLSSMAEIVQTIKTYKAFSGISPIPMFSIFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLMKEIAEKAAGAAASPLLRITAVVPEEYAVENRLVRENLNQFAHDLGIRAQVEFVPLRTFETVSFKAVRFLDGEKIAVLLSPAIFCRLGISCGSVGAFLADVRRMAPGVVVFVDGEGWTEAAAAASFRRGVVSSLEFYSMMLESLDASVAAGGGGEWVRRIEMLLLRPKIFAAVEGARRRTQPWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVDKRHAELVLCWHERAMVTTSAWRC 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02093 535 MobiDBLite consensus disorder prediction 1 69 - -
Pumo4g02093 535 MobiDBLite consensus disorder prediction 1 39 - -
Pumo4g02093 535 ProSiteProfiles GRAS family profile. 158 534 IPR005202 -
Pumo4g02093 535 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 158 529 IPR005202 -
Pumo4g02093 535 Pfam GRAS domain family 168 534 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02093 Pumo-Chr4 29815452 29817478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02093 65 534 GRAS Transcription Factor Family AT4G36710 53.659 4.88e-160 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo4g02093 GRAS 3.5e-82 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02093 - - gmx:100785004 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02093 4 29815452 29817478 Pumo4g02093 4 29815452 29817478 ECH
Pumo8g01860 8 54908351 54910220 Pumo4g02093 4 29815452 29817478 PCT