Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02091 ATGGGGGCTGGGGAAGAGAGCACAGCTAAACCTTCTAAATCATCTTCATCAGCTCAGCAGGAGACACCAACAGCAGCACCTGCATATCCTGATTGGTCAGGCTCCATGCAGGCCTATTATGCTCCTGGAGCCACTCCACCTCACTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCTTATTTATGGGGAAGCCAGCATCCTTTGATGCCGCCATATGGGACTCCAGTCCCATATCCAGCTATGTATCCTCCTGGGAGTATCTATGCTCATCCTAGCATGGCAGTGACTCCAAGTGCTGTCCAGCAAAGTACAGAGATTGAAGGGAAGGGAGCTGATGGAAAAGATCGGGACTCATCCAAAAAATTGAAAGGAACTTCGGCAAATACAGGTTCCAAAGCAGGAGAAAGTGGAAAGGCAGGCTCAGGTTCAGGAAATGATGGCATATCGCAAAGTGGTGAAAGTGGTTCAGAGGGTTCATCAAATGCTAGCGATGAGAATACTAACCAACAGGAATCAGCTACAAATAAGAAGGGAAGCTTTGACCTGATGCTTGTTGATGGAGCCAATGCACAGAACAATTCTGCTGGTCAATCTTCTGTGCCTGGAAAGCCTGTTGTCTCAATGCCAGCAACTAATCTTAACATTGGAATGGACTTATGGAATGCATCTTCTGGTGGTGCCGAAGCTGCAAAAATGAGACATAATCAATCTGGTGCCCCAGGAGTTGTTGCCCTTGGTGATCAATGGATACAAGATGAACGTGAGCTGAAAAAACAGAAGAGGAAACAGTCGAACAGAGAGTCAGCTAGGAGGTCAAGATTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCGCTGGGAGGTGAGAATCGAACTCTCAGAGAAGAGCTTCAGAGACTTTCTGAAGAATGCGAGAAGCTTACATCTGAAAATGATTCTATCAAGGAAGAGTTGGAACGGTTGTGTGGGCCAGAAGCAGTTGCTAACCTTGGATGA 1014 0.4714 MGAGEESTAKPSKSSSSAQQETPTAAPAYPDWSGSMQAYYAPGATPPHFFASTVASPTPHPYLWGSQHPLMPPYGTPVPYPAMYPPGSIYAHPSMAVTPSAVQQSTEIEGKGADGKDRDSSKKLKGTSANTGSKAGESGKAGSGSGNDGISQSGESGSEGSSNASDENTNQQESATNKKGSFDLMLVDGANAQNNSAGQSSVPGKPVVSMPATNLNIGMDLWNASSGGAEAAKMRHNQSGAPGVVALGDQWIQDERELKKQKRKQSNRESARRSRLRKQAECEELQKRVESLGGENRTLREELQRLSEECEKLTSENDSIKEELERLCGPEAVANLG 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02091 337 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 333 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pumo4g02091 337 MobiDBLite consensus disorder prediction 96 210 - -
Pumo4g02091 337 FunFam BZIP transcription factor 257 308 - -
Pumo4g02091 337 MobiDBLite consensus disorder prediction 8 26 - -
Pumo4g02091 337 Coils Coil 268 323 - -
Pumo4g02091 337 Pfam bZIP transcription factor 255 317 IPR004827 GO:0003700|GO:0006355
Pumo4g02091 337 CDD bZIP_plant_GBF1 260 310 IPR045314 GO:0003700|GO:0006355
Pumo4g02091 337 SMART brlzneu 255 319 IPR004827 GO:0003700|GO:0006355
Pumo4g02091 337 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 262 277 IPR004827 GO:0003700|GO:0006355
Pumo4g02091 337 MobiDBLite consensus disorder prediction 110 124 - -
Pumo4g02091 337 MobiDBLite consensus disorder prediction 257 281 - -
Pumo4g02091 337 MobiDBLite consensus disorder prediction 125 179 - -
Pumo4g02091 337 MobiDBLite consensus disorder prediction 1 31 - -
Pumo4g02091 337 Pfam G-box binding protein MFMR 1 95 IPR012900 -
Pumo4g02091 337 MobiDBLite consensus disorder prediction 188 207 - -
Pumo4g02091 337 Gene3D - 258 312 - -
Pumo4g02091 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 257 320 IPR004827 GO:0003700|GO:0006355
Pumo4g02091 337 SUPERFAMILY Leucine zipper domain 258 314 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02091 Pumo-Chr4 29792651 29799222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02091 1 336 bZIP Transcription Factor Family AT4G36730 54.142 2.22e-109 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pumo4g02091 MFMR 2.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02091 K09060 - gmx:778191 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02091 4 29792651 29799222 Pumo4g02091 4 29792651 29799222 ECH