Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02090 ATGGCTCCCGAGTTATTTAGCAAGGATCCACTTTCAAAAGGAGCAAAGAAATGCTATGATCATAAGGCAGATGTTTACAGTTTTGCAATGGTTATATGGGCGTTAATAAAAAATCAAACTCCATTCAAAGGAAGGAGTGAATTGTTGGCAGCATATGCTACTGCAAAAAACATGAGACCTAGTGTGGAGGAGTTTCCAAAAGATCTTCTTCCTTTATTGCAGTCATGTTGGGCAGAAGACCCAAAGCTACGACCTGAATTCTCAGAGATCACTCAAACCCTTGCAAAACTTCTCCACAACTATCGCTCAATAGGGATAACACCTGAGAAAAAAGAGTGTCCAACTACAAGTGTGCCGAAACCAATCCCTGATTATGTTCAAGACAACTCCAAACATATATATGAGCCTCAAAGTCAAAATACCAATGTCTGCACAAAGGGACAATCTCAAAGCATAGCACAAACCCCCAATCCAGTCTTAGCCCAAAAATGGGTGGGAGAGAATGGAGACCCAAATCTTTGGCGAGAAAGCCCAAGATTCCACGACGGGGTCACGGTTAGTTCGTCGTCATTCCGAGAGGGGTCCGGTCAACAGTCTAGGACGCTGTTGTGTGCTAGACGATTGGCGTCAGTGCTGGCCGGAGTCTTCTACCGCTGGCTGAGGGTGTTGTGGAGGAAAAGTGGAAAGTGA 690 0.4493 MAPELFSKDPLSKGAKKCYDHKADVYSFAMVIWALIKNQTPFKGRSELLAAYATAKNMRPSVEEFPKDLLPLLQSCWAEDPKLRPEFSEITQTLAKLLHNYRSIGITPEKKECPTTSVPKPIPDYVQDNSKHIYEPQSQNTNVCTKGQSQSIAQTPNPVLAQKWVGENGDPNLWRESPRFHDGVTVSSSSFREGSGQQSRTLLCARRLASVLAGVFYRWLRVLWRKSGK 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02090 229 ProSiteProfiles Protein kinase domain profile. 1 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02090 229 Pfam Protein tyrosine and serine/threonine kinase 1 94 IPR001245 GO:0004672|GO:0006468
Pumo4g02090 229 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
Pumo4g02090 229 PANTHER SERINE-THREONINE PROTEIN KINASE 1 99 - -
Pumo4g02090 229 SUPERFAMILY Protein kinase-like (PK-like) 1 108 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02090 Pumo-Chr4 29785391 29787878 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02090 1 103 MAP Kinase Kinase Kinase AT5G66710 59.223 4.80e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo4g02090 PK_Tyr_Ser-Thr 4.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02090 - K04427 gsj:114390113 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02090 4 29785391 29787878 Pumo4g02090 4 29785391 29787878 ECH