Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02089 ATGGCACAAGAACGTCGATTCTTCTCATTCTCAGACCCTAATCTCATCCTTCGTCTCTCACTATCAATGGCTGGCTCCTCAGAGAACACTGAACTTGGGGCAAGTGACGATGATGCTACTAAAGTAGAGGATGATTTTGTCTTTGATATAGATCCTAACTTGCTAGTGGATAGTCGTAAACTTTTAACTGGCGAAACCGATTATAGAAGGGGCACATTCCATTATCTACCATGGATGGTGGGTATTCCAATTGCAACTGTAAGATATATGTATGAATTCAATCCTGTATCTATAAAGGTTATGCTTCCAATGCAAACATCAAATGCTACTTCTCAATGTAAAGCAAAATTTCAGCGGGAGGTGAACTTGATATCTAAGATTAAACATAAAAATATTATAAAGTTTATTGGCGCCTCTGTGGAACCATCAATGATTATAATTACAGAACTTTTAGAAGGTTGTTCACTTCAGAAATACCTAGAGAGCATTTATCCAAGTACTCTAAGTTTAGAGCAATCCATAAGTTTTGCTATGGATATTTCTCAAGTTATGGAATATTTGCATGCTAATGGCATTATTCACCGCGATCTGAAGCCTGGTAATTTGTTTCTTCCTAAGGACAACATGCAAATTTTACTTACAAATTTTGAGACAGCTAGAGAGGAAATATCTGGTGCAATGACTTCCTGA 690 0.3696 MAQERRFFSFSDPNLILRLSLSMAGSSENTELGASDDDATKVEDDFVFDIDPNLLVDSRKLLTGETDYRRGTFHYLPWMVGIPIATVRYMYEFNPVSIKVMLPMQTSNATSQCKAKFQREVNLISKIKHKNIIKFIGASVEPSMIIITELLEGCSLQKYLESIYPSTLSLEQSISFAMDISQVMEYLHANGIIHRDLKPGNLFLPKDNMQILLTNFETAREEISGAMTS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02089 229 Gene3D Transferase(Phosphotransferase) domain 1 86 229 - -
Pumo4g02089 229 ProSiteProfiles Protein kinase domain profile. 62 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02089 229 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 91 228 - -
Pumo4g02089 229 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Pumo4g02089 229 SUPERFAMILY Protein kinase-like (PK-like) 94 225 IPR011009 -
Pumo4g02089 229 Pfam Protein tyrosine and serine/threonine kinase 96 220 IPR001245 GO:0004672|GO:0006468
Pumo4g02089 229 SMART serkin_6 78 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02089 Pumo-Chr4 29778141 29785371 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02089 44 228 MAP Kinase Kinase Kinase AT5G66710 44.681 6.10e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pumo4g02089 PK_Tyr_Ser-Thr 1.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02089 - K04427 gsj:114390113 348.591