Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02075 ATGAGCATTACCTTTTTCACTCCAAAAGTTAGTTATGCTAGCAAAGAATCCAAGGTAGAAGGCTTGGTAATGAATGAAATCGACCAATGCTGGAGATTTAATCCTGAATGGTGGAAAAATCGTTCACAACTTGCCACATGCTCGGTGGGCTATGTAGGGAAGATGACAAACAACATTGGTAAGGACCTTATCCGTTACAAAGTTATTGATCCTAGTGACAACCCAATAAACCCCAAATTTGGTACCTTGAGATATGGAGCTTCTAGGATTCAAGGCAAAGTTTGGATCACATTCCAAAGTGACATGCACATTAGGCTCGAGAAACCCCTTCTCATTAGTAGTTTCACCACCATTGATGGTCGAGGTGTCAATGTCCACATTGTTGATAATGCATGCTTGATGATCTTTAAGGCAACAAATGTAATCATCCATGGCATTAGAATTCATCATTGTCGACCTCAGGCTCCTGGAATGGTAATGGGTCCTAATGGAAACGTGATGCCTTTAGGTCAAGTTGATGGAGATGCAATAAGATTGGTTACGGCTTCAAATATTTGGATTGATCACAACACACTTTATGATTGCCAAGACGGTCTTCTTGACGTCACACGGGGTTCCACTAATGTGACTGTCTCCAACAATTGGTTCAGGGAGCAAAACAAAGTTATGCTTCTCGGACATGATGACGGGTATGTGAGAGACAAGGACATGAAGGTCACTGTTGTGTATAACTATTTTGGACCTAATTGCCACCAGCGCATGCCAAGAATTCGCCATGGGTATGCACATGTTGCAAACAATCTTTACATGGGATGGGTGCAATATGCCATAGGTGGAAGCATGGAACCTAGCCTCAAAAGCGAATCAAACCTCTTCATAGCACCAATGTCAGGGCGTAAGGAGGTTCAGGGTCAGCAACCTTACATTGGTTTGGCCACAACAGCATGTCAGCAAACGGGTAATTCAAACTCTATGCGTGGCTACACTTGCAATGGTGCAAATCCTAGTTGCCAAGCTTACCTCACCTTCAGGGCTAAACCCCATTACAACACTGTTCCCTCAATATCTGCTTTGTTGGGTTCTGACCCATCTCAGCTTTCTGAGGCAAATTCTGTTTCTCAGGATGCAATCTTTGAAACAAACAAGCTAGTGATTGTTCCAGTCAATTGCTCTTGTTCGGGTAACCAGTATTACCAGTTCAACACATCCTATGAGGTCCAGAGTGGGGACTCATATTTTTTGATCGCTAACAACACCTTTGAAGGCCTCTCAACATGTCAAGCATTGCAGGATCAGAATAACATTCCCGAAGGAGACTTAGTGCCTGGTGACAAACTCAATGTTCCTCTTAGATGTGCTTGTCCCTCAAGGAATCAAACTGAGCAAGGTGTGAAGTACTTGTTGAGTTACCTTGTAGCTTCTAGTGACACTGCTTGGCTCATTGGTGAAAGATTTGGTGTCAGCAGTGAGACAATTCTCGAAGCTAATAGTCTTTCTTCTCAGCAACCCACAATCCATCCTTATACCACACTTCTAGTTCCTCTTCAAGATGAGCCCTCGAGTGACCAAACTTCTGAGCCATCTCCACCACCACCTCCACCTCCATCTTCTTCAAATGGAAGCTCAAGCAACAAAACATGGGTGTATGCAGTTGTAGGAGTTGTTGGAGGTATTGCATTAGTATTAATCCTTTGTGCCATCATTTTCAGGACGCGCTATCTCAAGGGTGATAAAAAGAAAGATGATTCTGTGATTGTGTCTGATAGTTTTGTGGCTGTGGCTATTGAGAAACCACAAGGGAAGAAGTTGGAAGAAGAGTCTGAGAATTTGGCAGAGATCATATCTAGCATAGGTGAATCGTTCAAGGTGTACAGATTTAAGGAACTGCAAAGTGCAACAAATGATTTTAGTCCTAGCTGCTGCATCAGAGGGTCGGTTTATCGTGGTGTTATAAATGGAGATTTGTCTGCAATTAAGAAGATAGATGGTGATGTGTCAAAGGAGGTAGAACTTTTGACCAAAGTGAACCATTCTAATGTTATACGCCTCTCTGGGGTTTGCTTTAACGAGGGATATTGGTATCTTGTTTATGAGTATGCTGCTAATGGGAACTTGAGTGATTGGATCAACATCAATGGGAAGTTTCTGAGTTGGACACAGAGAATGCAGATTGCATTGGATGTGGCCACAGGACTTGACTATCTTCATAGTTTCACTTCTCCTCCGCATGTCCACAAGGATCTGAAGAGTGGTAACATTCTTCTGGATAGTGATTTCAGGGCAAAGGTTGCAAACTTTGGGCTTGCAAGGTCAATGGAAAGAGAGGGTGAGGGTGAGCAATATGTCATGACAAGGCATATTGTTGGGACAAGAGGGTACATGGCTCCAGAGTATTTGGAAAATGGTCTTGTGTCTACAAAGCTTGATGTCTATGCATTTGGGGTTCTGATGTTGGAAATGCTCACTGGAAAAGATGTTGATGATATTTATGCAGAAGGTAATAATGTGAATTTGTTGGATGTTTTAAGCATGGTACTTGATGAGGAAGGTGAACATGAGAGATTGAGGGAGTTCATGGATCCCTCTTTGCAAGGAAATTATCCAATGGAACTTGCTGTGTTTGTTGCTAGAATGATAGGCACTTGCATAAAGAAAGATCCAGCAAATCGCCCTGACATGAACGAGATTGTGTCATCTATGTCCAAAGCCTTGGACTCATCATTGAGATGGGAAACGCCCATGGAAATGAAGTTTTGA 2757 0.4269 MSITFFTPKVSYASKESKVEGLVMNEIDQCWRFNPEWWKNRSQLATCSVGYVGKMTNNIGKDLIRYKVIDPSDNPINPKFGTLRYGASRIQGKVWITFQSDMHIRLEKPLLISSFTTIDGRGVNVHIVDNACLMIFKATNVIIHGIRIHHCRPQAPGMVMGPNGNVMPLGQVDGDAIRLVTASNIWIDHNTLYDCQDGLLDVTRGSTNVTVSNNWFREQNKVMLLGHDDGYVRDKDMKVTVVYNYFGPNCHQRMPRIRHGYAHVANNLYMGWVQYAIGGSMEPSLKSESNLFIAPMSGRKEVQGQQPYIGLATTACQQTGNSNSMRGYTCNGANPSCQAYLTFRAKPHYNTVPSISALLGSDPSQLSEANSVSQDAIFETNKLVIVPVNCSCSGNQYYQFNTSYEVQSGDSYFLIANNTFEGLSTCQALQDQNNIPEGDLVPGDKLNVPLRCACPSRNQTEQGVKYLLSYLVASSDTAWLIGERFGVSSETILEANSLSSQQPTIHPYTTLLVPLQDEPSSDQTSEPSPPPPPPPSSSNGSSSNKTWVYAVVGVVGGIALVLILCAIIFRTRYLKGDKKKDDSVIVSDSFVAVAIEKPQGKKLEEESENLAEIISSIGESFKVYRFKELQSATNDFSPSCCIRGSVYRGVINGDLSAIKKIDGDVSKEVELLTKVNHSNVIRLSGVCFNEGYWYLVYEYAANGNLSDWININGKFLSWTQRMQIALDVATGLDYLHSFTSPPHVHKDLKSGNILLDSDFRAKVANFGLARSMEREGEGEQYVMTRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVLMLEMLTGKDVDDIYAEGNNVNLLDVLSMVLDEEGEHERLREFMDPSLQGNYPMELAVFVARMIGTCIKKDPANRPDMNEIVSSMSKALDSSLRWETPMEMKF 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02075 918 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 296 912 - -
Pumo4g02075 918 SMART serkin_6 636 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02075 918 SUPERFAMILY Pectin lyase-like 16 308 IPR011050 -
Pumo4g02075 918 PRINTS Pollen allergen Amb family signature 275 294 IPR018082 -
Pumo4g02075 918 PRINTS Pollen allergen Amb family signature 72 97 IPR018082 -
Pumo4g02075 918 PRINTS Pollen allergen Amb family signature 253 272 IPR018082 -
Pumo4g02075 918 PRINTS Pollen allergen Amb family signature 109 125 IPR018082 -
Pumo4g02075 918 PRINTS Pollen allergen Amb family signature 173 194 IPR018082 -
Pumo4g02075 918 MobiDBLite consensus disorder prediction 524 538 - -
Pumo4g02075 918 SUPERFAMILY LysM domain 468 514 IPR036779 -
Pumo4g02075 918 Gene3D LysM domain 458 529 IPR036779 -
Pumo4g02075 918 CDD LysM 402 448 IPR018392 -
Pumo4g02075 918 Pfam Pectate lyase 112 292 IPR002022 -
Pumo4g02075 918 Gene3D - 24 360 IPR012334 -
Pumo4g02075 918 SMART amb_all 101 298 IPR002022 -
Pumo4g02075 918 SMART LysM_2 403 449 IPR018392 -
Pumo4g02075 918 SMART LysM_2 469 514 IPR018392 -
Pumo4g02075 918 MobiDBLite consensus disorder prediction 516 542 - -
Pumo4g02075 918 Gene3D LysM domain 399 457 IPR036779 -
Pumo4g02075 918 SUPERFAMILY Protein kinase-like (PK-like) 619 898 IPR011009 -
Pumo4g02075 918 Pfam LysM domain 404 449 IPR018392 -
Pumo4g02075 918 Pfam LysM domain 470 514 IPR018392 -
Pumo4g02075 918 ProSiteProfiles Protein kinase domain profile. 611 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02075 918 FunFam PTI1-like tyrosine-protein kinase 3 700 914 - -
Pumo4g02075 918 ProSiteProfiles LysM domain profile. 402 448 IPR018392 -
Pumo4g02075 918 Gene3D Transferase(Phosphotransferase) domain 1 701 912 - -
Pumo4g02075 918 Pfam Protein kinase domain 656 898 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02075 918 ProSiteProfiles LysM domain profile. 468 513 IPR018392 -
Pumo4g02075 918 Gene3D Phosphorylase Kinase; domain 1 604 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02075 Pumo-Chr4 29497487 29503163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02075 304 911 Receptor kinase-like Gene Family AT2G23770 46.591 1.91e-177 525
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pumo4g02075 Pkinase 4.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02075 - - gmx:100806077 999.964