Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02058 ATGGTTGAGTTGGGGTGGTGGCTTGAAGGGAAGTGTAATTGCTCCAACAATGCATCCTGTGCAGAGGTCAATCTTGGTGGAGGAAAACGAGGCTACCGGTGCCGCTGCGATGATGGTTTCGTCGGAGATGGATTCAAAGACGGTGATGGTTGCCGGAGAGCTTCTCAATGCAAAGCTTCAACACTGTTGTCTGGCGAATGTAGGAAAGCAATCAAAATTGGTGTCCTTGTTGGAGGGATCATAGTTGGAGCTATCCTGGTGGCTGCTCTGTCTCTTCTATGTTACTTTTCAAGGCGTCGTTCCTCTTGGCTGAGAAAACAAGTGACAGTAAAGCGCCTATTAAGAGAAGCTGCAGGAGACTCAACTGTTCCTCTATATCCCTACAAAGAAATAGAAAGAGCCACAAGTTTTTTCTCTGAAAAACATAGGCTGGGAACTGGGGCTTTTGGCACAGTTTATGCTGGACACTTTCACAATGATGAGTGGGTTGCTATCAAAAAGATCAAGTATAGAGACACCAACAGTGTTGACCAAGTCTTGAATGAGATCAAGCTTCTTTCTTCAGTGAGTCACCCGAATTTAGTGCGCCTCTTAGGTTGCTGTATAGAAGGGGGGCAGCAGATACTTGTTTATGAGTACATGCCCAATGGAACACTATCTCAACATTTGCAAAGAGAGAGGGATGGAGTACTTCCATGGACAATAAGACTCACCATTGCTACTGAAACTGCTAATGCTATAGCATACCTCCATTCTGCAATTGATCCTCCAATTTATCATAGAGACATAAAATCCAGCAATATACTATTGGACTATAGCTTTCAATCAAAAGTGGCAGATTTTGGGCTTTCTAGGCTTGGCATGTCAGAAACATCACATATCTCAACCGCGCCACAAGGTACCCCGGGCTATGTTGATCCTCAATACCACCAGAACTTCCACCTTTCTGATAAAAGTGATGTCTACAGTTTTGGAGTGGTTTTGGTAGAGATAATAACAGCCATGAAAGTGGTTGATTTTGCGCGACCTCAGAGCGAAATCAACTTGGCTGCACTTGCTGTTGATAGGATCAGGAGGGGTTGTATAGATGACATCATAGATCCCTTCCTTGAGCCACATAGGGATGCTTGGACACTCTATTCTGTTCACAAGGTGGCTGAGCTTGCATTCAGATGCCTTGCTTTTCACAGTGACATGAGGCCTACCATGATTGAAGTGGCTGAGGAGCTGGAACTTATCAGGCGCAGTGGCTGGGCAACTATGGAGGAAACCATATGCACGGCTTCATCGGTTGGGTCCGTGTGTTCATCGCCTCGAATCGGAAGTGTGAATTCACTGAGAGGTGTTAGTTTTGAGAGAGCTGCAGGACATGGGAGTGAGACATTGATTGTTCCAAACAAGAGTGATATTTTTTTGCAATCAATTGAGGAGGTGAAGGACGGCTCCCCTGTGTCTGTGCATGATACTTGGTTAATTAGTGATGGAAGGTTGCTAGGTGAATTTACTGCCAAGAGTGCACCTATTAGTTGA 1530 0.4516 MVELGWWLEGKCNCSNNASCAEVNLGGGKRGYRCRCDDGFVGDGFKDGDGCRRASQCKASTLLSGECRKAIKIGVLVGGIIVGAILVAALSLLCYFSRRRSSWLRKQVTVKRLLREAAGDSTVPLYPYKEIERATSFFSEKHRLGTGAFGTVYAGHFHNDEWVAIKKIKYRDTNSVDQVLNEIKLLSSVSHPNLVRLLGCCIEGGQQILVYEYMPNGTLSQHLQRERDGVLPWTIRLTIATETANAIAYLHSAIDPPIYHRDIKSSNILLDYSFQSKVADFGLSRLGMSETSHISTAPQGTPGYVDPQYHQNFHLSDKSDVYSFGVVLVEIITAMKVVDFARPQSEINLAALAVDRIRRGCIDDIIDPFLEPHRDAWTLYSVHKVAELAFRCLAFHSDMRPTMIEVAEELELIRRSGWATMEETICTASSVGSVCSSPRIGSVNSLRGVSFERAAGHGSETLIVPNKSDIFLQSIEEVKDGSPVSVHDTWLISDGRLLGEFTAKSAPIS 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02058 509 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Pumo4g02058 509 SUPERFAMILY Protein kinase-like (PK-like) 121 413 IPR011009 -
Pumo4g02058 509 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Pumo4g02058 509 Gene3D Phosphorylase Kinase; domain 1 99 213 - -
Pumo4g02058 509 ProSiteProfiles Protein kinase domain profile. 138 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02058 509 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 491 IPR044652 GO:0004672
Pumo4g02058 509 SMART serkin_6 138 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02058 509 Pfam Protein kinase domain 139 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02058 509 FunFam Wall-associated receptor kinase-like 14 105 213 - -
Pumo4g02058 509 FunFam Wall-associated receptor kinase-like 20 214 423 - -
Pumo4g02058 509 Gene3D Transferase(Phosphotransferase) domain 1 214 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02058 Pumo-Chr4 29168786 29173622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02058 2 491 Receptor kinase-like Gene Family AT2G23450 62.753 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pumo4g02058 Pkinase 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02058 - - gmx:100810861 897.886