Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02029 ATGGCTATGATTGTGGATGCTGTTGTTGGAAAAGTGCTCGATGAACTGCTGAAGGAAGTTGTGGAAATGAAAGACAGGGCTGTGAAGTTCAGACCCACCCTGGAACACTTGGAGTCCACCCTCAAAACAGCAGAGCCGTTGGCTAAGCGGATTGATGCTCTTAACAAGGGATTGGATAAACCAGATGAGGGAACGCAGAAGCTGATCGATATGATTAAGAAAGGGAAGAAGCTCGTTAAGGATTGCTCTAAAGCTGAGTGGTGGAATTGTTGTTATAAGGCTGACTACCAAACCAAACTTCAAGACTTGGATGAGTCAATTCGTGAGTACTTTAATTTGGATATGCAAGGTCAGAACCAGGTGATTGGGTTGGAGAACCAGGTGATTGGGTTGAAGAATCAGGAAATTGGGTCGCAGAACCGTGAGATTGGGTTGCAGAACCGTGGGATCGGGTTGGAGAACCAGGTGATTGGGTTGCAGAACCGTGAGATTGGGTTCGAGAACCAGGTGATTGGGTTGCAGAACCGTGAGATTGGGTTCGAGACGCGGGTGATGGTAACCCAGATGCATCAGATAATAGTAAAAAATGTTCGGCGAAGAACTCAATTAAAAGGCGCGTGTTTGCCTCCGGACCCGCCAGCTTTCACTGTTGGGTTGGATGATGCTTTGAGGGAGTTGAAGCTGAGGGTACTGAATGACCATCATGGTGGCTCAGTCATCACAGTCACCGGAACAGGAGGTTTAGGGAAGTCAACGTTAGCCAAAATGTTTTGTAGGGACGAGGAAGTCAAAGGTAAATTCAAGGAAAACATATTCTTTGTAAACTTTGCGAGAGAGCCCAAGTTGATTGCCATAGTGCAGAGACTGTTTCAACACTGTGATTGCGAGATGCCAGAGTTTCAAAATGATGATGATGCGGCTATCCTATTGGAACATTTGTTTAAACAGATCGGGGAAAGTCCAATATTGTTGGTTCTCGATGATGTTTGGCCTGAATCAGTATCTCTTGTTGACAAATTTGTGTTCCATCGGATCCCAAACTACAAGATTTTAGTGACATCAAGAGTCGCAATTAGAGAATTTGAACTTCCATATGTCTTGAAACCCCTTGATGATGCCAATGCTATGAATCTGTTTTGCGACTCTGCATCCCTAAATCAGAGCAGCTCTCGTATTCCGGATGATGTTGTCAAAAAGATAGTGAAAGGGTGTAGTGGTTTTCCCTTGGCACTTAAAGTGATTGGCAGAAATCTAAAACATCGAAAACCGTATGCTTGGCAGAACATGGCGGATAAACTGTCCACAGGTCATTCTATTCTTGATTCTAGTGACTATGCTCCAGTGCTTGATTGTCTCCAGAAAAGCTTCGAAGTCTTGGATCCTAAGGTGGCCGAGTGTTTTAGGGACCTGAGCTTATTCCCTGAAGCCCAGAGGATCTCTGCTGCTGCCCTTGTTGATATATGGGCAGAACTGCTTGATGAAGATGATGTCACTGCAATGGAGAAGATCGATGAACTGGTTGACCGGAACATGGCTGATGTTCTTGTGACAAGGAATACTGCAAGTGGCACCGTTGACTACAATTACCACTATGTTACACAGCATGGTCTTCTTCGGGAACTAGCTATCCGTCAAACAAACCAGGAGCCAACGGAGAAGAGGAATAGACTAATAATTGACCTAAGTGGTGAAGCATTCACTCCAGAATGGTGCAACTTGCAGCCAACTGAGGTTGAGGTTCTAGTGCTGAACCTTCGAGAAAAGAAGCGCTCACTACCAATGTTCATGCAGAAAATGAATAAATTAAAAGTCCTGATAATAACAAATTATGATTTCTATCGTGCTGACTTGGAGAATTTCGAGCTGCTTGATTATCTGTCCAATCTCAAACGAATCAGATTAGAGAAGGTTTCAATTCCTTTCCTGAGCAAGACTGGAGAGCAACTGAAGAATCTGCAGAAATTCTCTTTCTTTATGTGCAATGTGAATGAAGCATTCAAAAATAGCACCTTTCAAGTTTGTGATGTGCTGCCAAATTTAGAGGAGATGAACATTGACTACTGTGATATGGTGGAATTGCCACTTGGGCTCTCTAATATTATTTCCCTGAAGAAGCTCCGTATCACAAACTGCCACAAGCTTTCTGCACTTCCCGAAGGAATTGGAAACTTGGTCAATTTGGAATCACTAAGGCTTACTTCCTGTACTGATTTAGAAGTGTTGTCAGACTCAATAACAAGCCTTCATAAACTGGAATTTCTTGACATCTCTGACTGCGTAAGCCTACATCCATTGCTTGAATATTCCGTGGAAGGGACCAGCCTTCCTAATCAGTATGAAGCATTGGTACACAATGGTAACCATTTCAAGATTAAAAGAGTACTGATGGCTATGATTCTGGATGCTGTTCTTGGGAAACTGCTTGATCAAGTGCTGAGTGAAGTTGTGGATATGAAAGACAGGGCTGTGAAGTTCAAATCCACCCTGGAAAGCTTGGAGTCCACCCTCAAAAGAGTAAAACCGTTGGCTAAGCAGATAGATGATCTTTACAAGCAATTGGATAAACCAACTGAGGAAACGGAGGAGCTGATCAATCAGTTGAAGAAGGGGAAGAAGCTCGTTAAGGAGTGCTCCAAAGTTCAGTGGTGGAATTGCTGTTATAAGGCCAATTACCAAGAGGAGCTTCAGGCCTTGGATAAGTCCATTTTAAATTACTTTAATTTGGATATGCAAGGTCATATAAACAGGACTGGGTTGGAGAACCAGGTGATGCTGACCGAGATTCGTGCAACCATTGTCGAAAATCCGAGAAGAAGGACTGAATTAAAGGGTGTGTGTTCGCCTCCGGGCCCGCCTGCTTTCACTGTTGGGTTGGATGTTCATTTGAGGGAGTTGAAGCTCAAGTTGCTGAACAACCATCATGCTGGCTCCGTGCTCACGGTCACCGGAACAGGAGGTTCCGGGAAGTCAACGTTGGCCAAAAAGTTTTGTTGTGATGAGGAAGTCAAAGGTAAATTCAAGGATAACATATTCTTCGTCACCTGTGCGAAAAAGCCCAAGTTGAATACTATAGTGCAGAGACTGTTCCAACACAATGGTTACCAGATGCCAGAGTTTCAAAGTGACGATGATACAGTTTATCAATTGGAAAATTTGCTAAAACAGATTGGAAAAAACCCAATACTGTTGGTCCTGGATGATGTTCCGCCCGAATCAGTATCTCTTGTTGACAAATTTGTGTTCCAGATCCCAAACTACAAGATTTTAGTGACATCAAGAATCACAATTAGAGGATTTGGCCAGCCATACGTGTTGAAATCACTTAATGAAGCTGATGCTATTAATTTATTTCGCCACTCTGCATCCCTGAATCAGAGTAGCTCTGACATTCCTGATAATATTGTCAAAAAGATAGCGAGAGGGTGCAGCGGTTCTCCCTTGGCACTTATAGTGAGTGGCAAATCACTGAGTCTTGAACCACCGGAGGTTAGGCACTACAAGGCCAAGAAAATGTCCAAGGGTTATTCAATTCTTGCTTCTAGTAACGATGTGCTTACTTGTCTCCAAAAAAGCTTCGATGACTTGGATCCTAAGGTGGCTGAGTGTTTTAGGGACCTAAGTTTATTTCCTGAAGCCCAGAGGATACCTGCAGCTGCCCTTGTTGATATATGGGCAGAACTGCATGATGAAGATGATGACAGCACAATGGAGAATATCTATGAACTCGTCAAACGGAACATGGCTGATATTGTTGTCACAAGGAATACTGCAAGTGGTATAGTTGACTACAATTACCACTATGTTACACAGCATGGTCTTCTTCGGGACCTAGCTATCCATCAAACGAGAAAGGAACCAACGGAGAAGAGGAATAGACTAATTATTGACGTAAGAGATATGAAATTGCAGGAAGAGATCGAATTGTTGAAGCTTCTTACAAGGATGATGATCTTGATGAGGTTCTCGTTGTTCCCTCTCTTTGACGACGAGGAAGCAGTTTTAAAAATCAGACCGAAAATAGGAGGTTTTAACAGTGTCAAGAGTGCAACATGCTTTCATCACTGCACCGGAGGCTTTCAATGGAATAGCTTGGAGATCCTGGAGATTGTTAGAAATGTTGTTCTGACGAGGATAAGAGCGTGTACGCCTCCGGACCCCCCTGATTTTACTGTTGGGTTGGATGAAGCTTTGAGGGAGTTAAAGCTCAAGTTGCTGAAGAACCATCATGGTTACTCAGTGCTCACAATCACCGGAGAAGGAGGTTCGGGGAAATCAACGTTGGCCAAGAAGTTTTGTTGGGATGAGGAAGTCAAAGGTAAATTCAAGGGAAACATATTCTTCGTCACCTTTTCGAAAACGCCCGAGTTGAATACGATAGTGCAGAGACTGTTTGAACACAATGATTGCCAACCGCCAAAGTTTCAAAGTGAGGATGATACTGTTAACCAATTGGGACATCTGCTAAAACAGATTGGGAAAAACCCAATGTTGTTGGTCCTGGATGATGTTTGGCCCGAGTCAGCATCTCTTGCTGACAAATTTGTGTTCCATCAGATCCCAAACTACAAGATTTTAGTGACATCAAGATCCACAATTAGAGGATTTGGCCAGCCATACGTGTTGAAAACACTTAATGAAGCTGATGCTATAAATTTATTTCGCCACTCTGCATCCCTAAATCAGAGTAGCTCTGAGATTCCTGATAATGTTGTCAACGAGATAGCGAGAGGGTGCAGTGGTTCTCCCTTGGCACTTACAATGAGTGGCAAATCACTAAGTCTTGAACCACTGTTGGTTTGGCAAAACAGGGCGAAGAAATTGTCCACGGGTCATCAATTTTTTGATTTTGATTCTAGTAAAGATGTGCTTACTTGTCTCCAAAAAAGCTTCGAAGACTTGGATGCTAAGGTGGCTGAGTGTTTTAGGGACCTAAGCTTATTTCCTGAAGCTCAGAGAATCCCCGCAGCTGCCCTCGTTGATATATGGGCAGAACTGTGTAATGAAGATGATGACACTGCAATGGAGAATAACTATGAACTCGAAAAACGGAACATGGCTGAAATTGTTGTCACAAGGAATACTGCAAGTGGCACAGTTGACTACAATTACCACTATGTTACGCAGCATGGTCTTCTTCGAGAACTAGCTATCCATCAAACAAGCCAGGAGAAACCAGAGAAGAGGAAAAGACTAGTTATTGACATAAGTGGTAACAATCTTCCTGAATGGTGGACTACACAAAATGAGTACCACATCGATGCCCGCACACTATCCATATCAACCGATGAAGCATTCACTTCAGAATGGAATACTGCAAGTGGCACAGTTGACTACAATTACCACTATGTTACGCAGCATGGTCTTCTTCGGGACCTAGCTATCCTTCAAACAAGCCAGGAGAATCAAGAGAAGAGGAAAAGACTAGTTATTGACATAAGTGGTAGCAATCTTCCTGAATGGTGGACTACACAAAATGAGTACCACATTGTAGCCCGCACACTATATATCCATATCAATCGTCCATGCCATGCTTTATCTTTAGAACACAATAACCATCATAACTCCATTCAGAGTCGCACCAAAATTTTCAAACCTAAAATTGCAGGAAGAGGAAATCAAATTGTTGAAGCTTCTTACAAGGAGGATCTTGACGAGGTTCTCGTTGTTCCTTCTTTTTGA 5679 0.4305 MAMIVDAVVGKVLDELLKEVVEMKDRAVKFRPTLEHLESTLKTAEPLAKRIDALNKGLDKPDEGTQKLIDMIKKGKKLVKDCSKAEWWNCCYKADYQTKLQDLDESIREYFNLDMQGQNQVIGLENQVIGLKNQEIGSQNREIGLQNRGIGLENQVIGLQNREIGFENQVIGLQNREIGFETRVMVTQMHQIIVKNVRRRTQLKGACLPPDPPAFTVGLDDALRELKLRVLNDHHGGSVITVTGTGGLGKSTLAKMFCRDEEVKGKFKENIFFVNFAREPKLIAIVQRLFQHCDCEMPEFQNDDDAAILLEHLFKQIGESPILLVLDDVWPESVSLVDKFVFHRIPNYKILVTSRVAIREFELPYVLKPLDDANAMNLFCDSASLNQSSSRIPDDVVKKIVKGCSGFPLALKVIGRNLKHRKPYAWQNMADKLSTGHSILDSSDYAPVLDCLQKSFEVLDPKVAECFRDLSLFPEAQRISAAALVDIWAELLDEDDVTAMEKIDELVDRNMADVLVTRNTASGTVDYNYHYVTQHGLLRELAIRQTNQEPTEKRNRLIIDLSGEAFTPEWCNLQPTEVEVLVLNLREKKRSLPMFMQKMNKLKVLIITNYDFYRADLENFELLDYLSNLKRIRLEKVSIPFLSKTGEQLKNLQKFSFFMCNVNEAFKNSTFQVCDVLPNLEEMNIDYCDMVELPLGLSNIISLKKLRITNCHKLSALPEGIGNLVNLESLRLTSCTDLEVLSDSITSLHKLEFLDISDCVSLHPLLEYSVEGTSLPNQYEALVHNGNHFKIKRVLMAMILDAVLGKLLDQVLSEVVDMKDRAVKFKSTLESLESTLKRVKPLAKQIDDLYKQLDKPTEETEELINQLKKGKKLVKECSKVQWWNCCYKANYQEELQALDKSILNYFNLDMQGHINRTGLENQVMLTEIRATIVENPRRRTELKGVCSPPGPPAFTVGLDVHLRELKLKLLNNHHAGSVLTVTGTGGSGKSTLAKKFCCDEEVKGKFKDNIFFVTCAKKPKLNTIVQRLFQHNGYQMPEFQSDDDTVYQLENLLKQIGKNPILLVLDDVPPESVSLVDKFVFQIPNYKILVTSRITIRGFGQPYVLKSLNEADAINLFRHSASLNQSSSDIPDNIVKKIARGCSGSPLALIVSGKSLSLEPPEVRHYKAKKMSKGYSILASSNDVLTCLQKSFDDLDPKVAECFRDLSLFPEAQRIPAAALVDIWAELHDEDDDSTMENIYELVKRNMADIVVTRNTASGIVDYNYHYVTQHGLLRDLAIHQTRKEPTEKRNRLIIDVRDMKLQEEIELLKLLTRMMILMRFSLFPLFDDEEAVLKIRPKIGGFNSVKSATCFHHCTGGFQWNSLEILEIVRNVVLTRIRACTPPDPPDFTVGLDEALRELKLKLLKNHHGYSVLTITGEGGSGKSTLAKKFCWDEEVKGKFKGNIFFVTFSKTPELNTIVQRLFEHNDCQPPKFQSEDDTVNQLGHLLKQIGKNPMLLVLDDVWPESASLADKFVFHQIPNYKILVTSRSTIRGFGQPYVLKTLNEADAINLFRHSASLNQSSSEIPDNVVNEIARGCSGSPLALTMSGKSLSLEPLLVWQNRAKKLSTGHQFFDFDSSKDVLTCLQKSFEDLDAKVAECFRDLSLFPEAQRIPAAALVDIWAELCNEDDDTAMENNYELEKRNMAEIVVTRNTASGTVDYNYHYVTQHGLLRELAIHQTSQEKPEKRKRLVIDISGNNLPEWWTTQNEYHIDARTLSISTDEAFTSEWNTASGTVDYNYHYVTQHGLLRDLAILQTSQENQEKRKRLVIDISGSNLPEWWTTQNEYHIVARTLYIHINRPCHALSLEHNNHHNSIQSRTKIFKPKIAGRGNQIVEASYKEDLDEVLVVPSF 1892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02029 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 207 470 IPR027417 -
Pumo4g02029 1892 Gene3D Ribonuclease Inhibitor 541 785 IPR032675 -
Pumo4g02029 1892 Gene3D - 1543 1629 IPR042197 -
Pumo4g02029 1892 Gene3D - 1107 1191 IPR042197 -
Pumo4g02029 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1372 1644 IPR027417 -
Pumo4g02029 1892 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 6 119 IPR008808 -
Pumo4g02029 1892 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 802 931 IPR008808 -
Pumo4g02029 1892 Gene3D - 370 454 IPR042197 -
Pumo4g02029 1892 Pfam NB-ARC domain 226 457 IPR002182 GO:0043531
Pumo4g02029 1892 Pfam NB-ARC domain 961 1171 IPR002182 GO:0043531
Pumo4g02029 1892 Pfam NB-ARC domain 1396 1631 IPR002182 GO:0043531
Pumo4g02029 1892 Gene3D - 1369 1533 IPR027417 -
Pumo4g02029 1892 Gene3D - 194 360 IPR027417 -
Pumo4g02029 1892 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Pumo4g02029 1892 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 943 1206 IPR027417 -
Pumo4g02029 1892 Gene3D - 943 1097 IPR027417 -
Pumo4g02029 1892 Gene3D - 455 540 IPR036388 -
Pumo4g02029 1892 Gene3D - 1630 1717 IPR036388 -
Pumo4g02029 1892 Gene3D - 1192 1281 IPR036388 -
Pumo4g02029 1892 ProSiteProfiles RPW8 domain profile. 793 944 IPR008808 -
Pumo4g02029 1892 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 765 IPR039203 GO:0050832
Pumo4g02029 1892 PRINTS Disease resistance protein signature 316 330 - -
Pumo4g02029 1892 PRINTS Disease resistance protein signature 746 762 - -
Pumo4g02029 1892 PRINTS Disease resistance protein signature 239 254 - -
Pumo4g02029 1892 PRINTS Disease resistance protein signature 404 418 - -
Pumo4g02029 1892 SMART AAA_5 236 389 IPR003593 GO:0016887
Pumo4g02029 1892 SMART AAA_5 1410 1563 IPR003593 GO:0016887
Pumo4g02029 1892 SMART AAA_5 975 1108 IPR003593 GO:0016887
Pumo4g02029 1892 SUPERFAMILY L domain-like 535 763 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02029 Pumo-Chr4 28537203 28585182 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02029 240 767 WRKY Transcription Factor Family AT5G45050 22.083 3.21e-09 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02029 - - gmx:100812310 952.199