Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02016 ATGGATCGGGCGGCGTTGACGGTTGGACCGGGCATGGACATGCCGATCATGCACGACAGCGACCGTTACGATCTGGTCCGCGACATCGGGTCCGGGAATTTCGGCGTGGCGAGGCTGATGCAGGATAAACAGACCAAGGAACTCGTCGCCGTCAAGTACATCGAAAGGGGCGATAAGATTGATGAAAATGTAAAGAGGGAAATCATTAATCACAGGTCTCTCAGACATCCTAACATTGTTAGGTTTAAAGAGGTCATTTTAACACCTACTCATTTGGCCATTGTAATGGAATATGCATCTGGAGGAGAGCTCTTTGGGCGAATCAGCAAATCTGGGCGTTTTACTGAGGATGAGGCTCGATTCTTCTTTCAGCAACTCATATCTGGGGTCAGCTATTGCCATGCTATGCAAATATGTCATCGGGACTTGAAGCTGGAAAACACTTTGCTGGATGGAAGCCCGGCACCTCGTTTAAAGATATGCGATTTTGGGTACTCCAAGTCTTCAGTGCTTCATTCACAACCAAACTCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTGTTGAAACAAGAGTATGATGGCAAGCTTGCAGATGTCTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGAGCATATCCTTTTGAAGATCCTAACGAACCAAAGGACTTTCGGAAGACAATTCAGAGAATTCTTAGTGTCCAGTATTCCATTCCAGACGGTGTTCAAATATCACCAGAGTGTTGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCGGCAGAGAGAATCACCATGTCTGAAATCTGGAACTATGAATGGTTTCTGAAGAATCTCCCCGCGGATCTGATGGATGAGAAGATAATGAGCAATCAATTTGAAGAGCCAGACCAACCCATGCAGAGCATTGATACGATCATGCAGATAATTTCAGAAGCTACCGTACCAGCAGCTGGGGCCTATTCTTTTGACCACTTTATGGAGGAGCAAATTTATGACTTGGAATCTGAATCTGATGCTGAATCTGATCTTGATATAGATAGCAGTGGGGAGATAGTGTATGCCATATAA 1083 0.4506 MDRAALTVGPGMDMPIMHDSDRYDLVRDIGSGNFGVARLMQDKQTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFGRISKSGRFTEDEARFFFQQLISGVSYCHAMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPNSTVGTPAYIAPEVLLKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRILSVQYSIPDGVQISPECCHLISRIFVFDPAERITMSEIWNYEWFLKNLPADLMDEKIMSNQFEEPDQPMQSIDTIMQIISEATVPAAGAYSFDHFMEEQIYDLESESDAESDLDIDSSGEIVYAI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02016 360 SUPERFAMILY Protein kinase-like (PK-like) 16 318 IPR011009 -
Pumo4g02016 360 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
Pumo4g02016 360 Pfam Protein kinase domain 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02016 360 FunFam Serine/threonine-protein kinase SRK2E 99 287 - -
Pumo4g02016 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Pumo4g02016 360 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Pumo4g02016 360 PANTHER SERINE/THREONINE KINASE 22 305 - -
Pumo4g02016 360 SMART serkin_6 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g02016 360 FunFam Serine/threonine-protein kinase SRK2E 14 98 - -
Pumo4g02016 360 Gene3D Transferase(Phosphotransferase) domain 1 99 286 - -
Pumo4g02016 360 ProSiteProfiles Protein kinase domain profile. 23 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02016 Pumo-Chr4 27644420 27649658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02016 22 283 CBL-interacting serine-threonine protein kinases AT5G25110 44.161 1.76e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pumo4g02016 Pkinase 1.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02016 K14498 - gmx:100806949 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02016 4 27644420 27649658 Pumo8g01922 8 55682643 55688743 PCT