Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02015 ATGGAGCTGAGTTTGGATTTGAGTTTGGCCTTTGTCCCCAGAAGAACCGTTTGTGAGATTCTCGGCGAGGTTGCTCAGAGCAAAGATGGGTCTCAGAGAATGGCCACGCTTGAGGACTTTCTGAAAAGGTTGGAAGATGAGAAGAGGAAGATCGAGGCCTTCAAACGTGAGCTTCCTCTTTGCATGGTCCTTGTAAACCATGCTATAACTAAATTGAAAGAGGAACTAAACGGGGGTGTGAGAATGCAAGATGAAGCCGTGGTTGAAGAATTGATGCCACTTATGAAAACCAATTCTGAAGGAAATGGGTCTTTGAACATGGGTAAGGAAAGCAGTGACATGAAGAATTGGATGAACTCTGTTCAGCTATGGAACGTTGAAACCAAAAAGAGGAATGAAGAGGGTGATCGGTGTGTGCCCAACAATCCAATTGAACCAAAGAACGAGACAAACAAGAGTGGAGGAGCATCACTAGCATTGAATGGAAACAAGTGTGTCTCAAAGACAGTGATGAGGGATGACAAGGAGGTGTCACAGGTTCCTAGTCTTGGTTTGATGAGTCCAGTGCTTGAATTGAATCATAGAAAAACAGAAAGTGGTTATGGACATGGTTCAATTGAGATAAAGGGTCAATCACAACCTCAGCAGAATCCGAGGAAACAAAGGCGATGCTGGTCACCAGATCTTCATCGGCGATTTGTTGATGTGCTTCAACAATTAGGGGGACCACAAGTGGCCACTCCAAAGCAGATTAGAGAACTGATGCAGGTGGTAGGCCTCACAAATGATGAAGTGAAAAGCCATTTGCAAGTGGGGGTTTATTTAGATTATGTTTGGATAAATTTCTCCTTAAATATTTATTGGAAAAGAAAATAA 876 0.4304 MELSLDLSLAFVPRRTVCEILGEVAQSKDGSQRMATLEDFLKRLEDEKRKIEAFKRELPLCMVLVNHAITKLKEELNGGVRMQDEAVVEELMPLMKTNSEGNGSLNMGKESSDMKNWMNSVQLWNVETKKRNEEGDRCVPNNPIEPKNETNKSGGASLALNGNKCVSKTVMRDDKEVSQVPSLGLMSPVLELNHRKTESGYGHGSIEIKGQSQPQQNPRKQRRCWSPDLHRRFVDVLQQLGGPQVATPKQIRELMQVVGLTNDEVKSHLQVGVYLDYVWINFSLNIYWKRK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02015 291 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 16 270 IPR044787 GO:0003700|GO:0006355
Pumo4g02015 291 MobiDBLite consensus disorder prediction 206 222 - -
Pumo4g02015 291 SUPERFAMILY Homeodomain-like 218 270 IPR009057 -
Pumo4g02015 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 217 277 IPR017930 -
Pumo4g02015 291 NCBIfam myb-like DNA-binding domain, SHAQKYF class 220 271 IPR006447 GO:0003677
Pumo4g02015 291 Coils Coil 37 57 - -
Pumo4g02015 291 MobiDBLite consensus disorder prediction 131 160 - -
Pumo4g02015 291 MobiDBLite consensus disorder prediction 144 160 - -
Pumo4g02015 291 MobiDBLite consensus disorder prediction 197 222 - -
Pumo4g02015 291 Gene3D - 219 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02015 Pumo-Chr4 27603327 27606186 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02015 1 284 G2-like Transcription Factor Family AT4G37180 38.488 6.07e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pumo4g02015 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02015 - - gmx:100794220 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g02015 4 27603327 27606186 Pumo4g02015 4 27603327 27606186 ECH
Pumo4g02015 4 27603327 27606186 Pumo8g01924 8 55708343 55710113 PCT