Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02011 ATGTCGTTTTGCTACTCACATCGAACCCCAGAATCCTCCAGAGAAGCCTTAACAACCACATCATCCCTCTCTACGAACTTCTACATCGCTTCTTGCATTCCGATAAAGACACCATTGCCCTACACGTTGGAGGAGGTGAAGGGCTTGGGGTTTGACCCTTCCAAATTAACTTTTGCGAGGGCCTTGCTGACCAAGAGGGCTGTTGGGAAAACGCGACGGGATGAGAAAGTTGATGCCTTTAAGAAGTTGGGGTGGAGTAGTGAAGATGTTGTTCATGCATTTAGCGTTCAACTTGGTGTGATGCTGGTGTTTAGTGATAAGATTAACTTGTTGATGGGTTTTTGGGTCAATCAGATGGGTTGGAATGCTTTGGCACTTGTGAAAGGGCCATTTGTTTTCGGGTATAGTTTCGAGAGAAGGATCGTTCTGAGGGCCTCCGTTGTGCAGGTTGTTCTTGGATTTGAAATACTTGTCCTGTCTAAGCCTGGTTGGGGCTAG 498 0.4679 MSFCYSHRTPESSREALTTTSSLSTNFYIASCIPIKTPLPYTLEEVKGLGFDPSKLTFARALLTKRAVGKTRRDEKVDAFKKLGWSSEDVVHAFSVQLGVMLVFSDKINLLMGFWVNQMGWNALALVKGPFVFGYSFERRIVLRASVVQVVLGFEILVLSKPGWG 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02011 165 PANTHER CGI-12 PROTEIN-RELATED 42 151 IPR003690 GO:0003690|GO:0006355
Pumo4g02011 165 Gene3D Transcription termination factor 3, mitochondrial 22 160 IPR038538 -
Pumo4g02011 165 Pfam mTERF 75 148 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02011 Pumo-Chr4 27515659 27516489 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pumo4g02011 mTERF 4.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02011 K15032 - aprc:113852255 126.716