Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g02008 ATGGAGTGCACTTCCAATAAGCATTCTTTTGTTCTCACGATCTTGCTCGTACTTCTTAGTCCTCTAGCACGCTGCCAACTTAGATATGAGTACTATTTTGCAACATGTCCAACCCTGACTTTGACTGTTCGAGACTCACTCGTGTTAGCTATGGCCCATGAACCAAGGATTGCAGCTTCTATCTTGCGCCTTCATTTCCATGATTGTTTTGCCAATGGATGTGATGGATCTGTGCTACTTGATGATACCAGCAGTTTTAAAGGGGAGAAAAGTGCATTGCCTAATCTAAATTCAATAAGAGGATTTGAGCTCATTGACACAATCAAGTCTCAAATAGAGTGTGCATGTCCATCCACCGTGTCATGTGCTGATATACTAGCTCTAGAAGCTGTTAATCTTAGTATAGGACCATATTGGCAACCAGCACTTCTTGGTCGTAGAGATGGCACAACAGCAAGTGAGAGCGAGGCTAGTCGGTTACCTTCACCCTTTGACACCTTACAAAACATTACCAACAAGTTCCTTTCCAAGGGTCTTGATATTAAGGATTTAGTAGTGCTCTCAGGAGCCCACACCATAGGCTTTGCTCAATGCTTTGCATTCAAGCAAAGGCTATTCAACTATAAAGGCACTGGCAAACCGGATCCATCACTGGATGCTTCACTTTTACAACATTTACAGAAACTGTGTCCAGATAATAATTCTGATTCTGACACCCATTTGGCTCCCTTGGATCCTCTCACCACATACATATTTGATAACAAGTATTACAAAAATCCTTGA 783 0.4202 MECTSNKHSFVLTILLVLLSPLARCQLRYEYYFATCPTLTLTVRDSLVLAMAHEPRIAASILRLHFHDCFANGCDGSVLLDDTSSFKGEKSALPNLNSIRGFELIDTIKSQIECACPSTVSCADILALEAVNLSIGPYWQPALLGRRDGTTASESEASRLPSPFDTLQNITNKFLSKGLDIKDLVVLSGAHTIGFAQCFAFKQRLFNYKGTGKPDPSLDASLLQHLQKLCPDNNSDSDTHLAPLDPLTTYIFDNKYYKNP 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g02008 260 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Pumo4g02008 260 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Pumo4g02008 260 PANTHER PEROXIDASE 72-RELATED 25 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 Pfam Peroxidase 44 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 Gene3D Peroxidase, domain 2 161 259 - -
Pumo4g02008 260 Gene3D - 30 160 - -
Pumo4g02008 260 SUPERFAMILY Heme-dependent peroxidases 26 259 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo4g02008 260 CDD secretory_peroxidase 26 259 IPR033905 GO:0004601|GO:0042744
Pumo4g02008 260 FunFam Peroxidase 161 260 - -
Pumo4g02008 260 ProSiteProfiles Plant heme peroxidase family profile. 26 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g02008 Pumo-Chr4 27485220 27487015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g02008 26 259 Peroxidase AT1G49570 59.583 9.59e-95 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g02008 K00430 - gmx:100789642 430.254