Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01977 ATGAGTCTCTCGAGCGAGCTTCGAATTACGAATTCTTCGCAAGAGGTGGATTCAGCGGAGCAGACCAAAGCCAAATCTCGCTGCGTTCTATCGACGCCGCAGAAAATGCCAACGGAGTCGGAGCTCGAAGAATTCTTCGCTGCCGCAGAGAAAGACGTTCAGAAACGCTTCTCAGAAAAGTATAATTATGATATCGTGAAGGACGTGCCATTGGAAGGACGATACGAGTGGGTTAAATTGAAGCCATAA 249 0.4779 MSLSSELRITNSSQEVDSAEQTKAKSRCVLSTPQKMPTESELEEFFAAAEKDVQKRFSEKYNYDIVKDVPLEGRYEWVKLKP 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01977 82 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 8 81 IPR044275 GO:0004861|GO:0045736|GO:0051726
Pumo4g01977 82 Pfam Cyclin-dependent kinase inhibitor 36 80 IPR003175 GO:0004861|GO:0005634|GO:0051726
Pumo4g01977 82 PIRSF CKI_KRP_plant 2 82 IPR044275 GO:0004861|GO:0045736|GO:0051726
Pumo4g01977 82 Gene3D p27 21 82 IPR044898 -
Pumo4g01977 82 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01977 Pumo-Chr4 26997979 26999252 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01977 37 82 Core Cell Cycle Gene Families AT1G49620 71.739 3.99e-21 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01977 - - ccaj:109818608 138.658