Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01962 ATGGCGGCGATGAGGGAGATGATATTCCGAATAGCGGTGATGCAGCCGATTCACATAGACGCTGAATCCATCAAGCCACCGAAGAGAAGGAACGTGAAGATCTCAAAGGATCCGCAGAGCGTGGCGGCGAGGCACCGAAGGGAAAGGATAAGCGAGAGGATAAGGATTCTTCAGAGATTAGTCCCCTGGCGGCACCAAAATGGACACTGCTTCTATGTTGGACGAGGCCATTCACTACGTCAAGTTCTTGAAGAAACAGGTGCAGACGCTGGAACAAGCAGGGGCAAATAG 291 0.5189 MAAMREMIFRIAVMQPIHIDAESIKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPWRHQNGHCFYVGRGHSLRQVLEETGADAGTSRGK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01962 96 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 1 63 IPR045843 GO:0003700|GO:0006355
Pumo4g01962 96 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 38 66 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01962 Pumo-Chr4 26720542 26720832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01962 1 62 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 93.548 4.27e-27 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01962 - - gmx:100812308 104.76