Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01961 ATGGATTGGGTTCGAGGAGACGCCGTTGGACGAGGAAGCTTCGCCACCGTTAGTTTAGCGATCCCCGCAACCACAAGCAATCCCGCTCAGTTTCCGTCTATAACCGCCGTTAAGTCCTCGGAAGCGCTCGCCTCATGCTGGCTGAAAAACGAGAAACACGTGCTCGATCGCCTAGGTTCGTGTACGAGGATAATTCGCTGCTTCGGAGATGACTGCAGTTTCGAGAATGGTGTCGAGTACTACAATTTGTTTCTCGAGTACGCGGCCGGCGGGAGTCTCGCCGACGAGTTAAAAAACCGCGGCGGCCGGATTCCCCGAGCCTGA 324 0.5586 MDWVRGDAVGRGSFATVSLAIPATTSNPAQFPSITAVKSSEALASCWLKNEKHVLDRLGSCTRIIRCFGDDCSFENGVEYYNLFLEYAAGGSLADELKNRGGRIPRA 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01961 107 ProSitePatterns Protein kinases ATP-binding region signature. 9 38 IPR017441 GO:0005524
Pumo4g01961 107 ProSiteProfiles Protein kinase domain profile. 3 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01961 107 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 98 - -
Pumo4g01961 107 SUPERFAMILY Protein kinase-like (PK-like) 3 102 IPR011009 -
Pumo4g01961 107 Gene3D Phosphorylase Kinase; domain 1 1 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01961 Pumo-Chr4 26677486 26677809 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01961 1 106 MAP Kinase Kinase Kinase AT4G36950 54.717 7.23e-34 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01961 - - gmx:100798607 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01961 4 26677486 26677809 Pumo4g01961 4 26677486 26677809 ECH
Pumo8g01956 8 56167106 56168293 Pumo4g01961 4 26677486 26677809 PCT