Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01956 ATGCTTGATGAAGCTATTGAATATCTTAAACAGCTTCAGCTCCAAGTACAGATGCTGTCAATGAGAAATGGGTTCAGTTTGCATCCTATGTTCTTTCCAGAAGGTTTGCAACCTCTGCAATTGTCTGAGATGAGAATTGATTCAGGTGAAGAAAACAGATCAATCCCTTCAAACACGACAGCTACTCTGCCTATGCACCAAGAAAACCCCATGCACTATTCGTCCAATCTACCTAACAAACACGCAGTGCCATCCTTGCTCACTCCATCATATATAATCAACTCAGAAACTTCTTTCAGGCTGGAATCTCCTGTTCCAGAAAATATAAGATCATTTCAACTCAGAAGATTTTCTGAGATATGCAGGGAAGACATATTGCAGCACCAGCATCTAAATGCAAACCATTCAGATACCAATCCATTAGGCTGTTCTCAAGGCACATTGGCTACAGCATCACTTTCCTTTGATATGCAAACATCTGCAGTTAAAGACAACTGCACTTTGGAAAATTGCATCACTGGAAGTGATCAATCAGGAGTGATACTGAGAACTAGTGAGCCAAACATTATTCTTGCCCCGCGGTTAAGTGGGTAA 594 0.4108 MLDEAIEYLKQLQLQVQMLSMRNGFSLHPMFFPEGLQPLQLSEMRIDSGEENRSIPSNTTATLPMHQENPMHYSSNLPNKHAVPSLLTPSYIINSETSFRLESPVPENIRSFQLRRFSEICREDILQHQHLNANHSDTNPLGCSQGTLATASLSFDMQTSAVKDNCTLENCITGSDQSGVILRTSEPNIILAPRLSG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01956 197 Coils Coil 2 22 - -
Pumo4g01956 197 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 1 127 IPR031066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01956 Pumo-Chr4 26624037 26625827 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01956 1 142 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 40.000 1.07e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01956 - - vun:114177198 300.056