Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01955 ATGTCTTCTTCGTCCTCTTCCACACAGGACGAAATCTCCCTTGTCCTGCGTCAGTTTCTTCTCCGTTCATCCCTCACAAACCACGAGGGTAACGACGCACGCAATTCTATGTCTGCACTACGAGATGGGATCTCGGCCTACAAGGGTTCTTCTGCTGCCAACGTGTCTTCTTCGTCGGTGCCACCAGCAAGTGAGAATGAAACCGATGACTACGACTGCGACAGTGAGGAGGGTGAAGCGTTGGTAGAAGAGCTTCCAGTTCCACCACCAAAGTCGGTTCGTTCTAGGAGTTCCTCCAAAAGGAGCAGAGCTGCGGAAGTTCATAACCTCTCTGAAAAGAGGAGGAGGAAGTAA 354 0.5141 MSSSSSSTQDEISLVLRQFLLRSSLTNHEGNDARNSMSALRDGISAYKGSSAANVSSSSVPPASENETDDYDCDSEEGEALVEELPVPPPKSVRSRSSSKRSRAAEVHNLSEKRRRK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01955 117 MobiDBLite consensus disorder prediction 49 65 - -
Pumo4g01955 117 MobiDBLite consensus disorder prediction 49 117 - -
Pumo4g01955 117 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 5 116 IPR031066 -
Pumo4g01955 117 MobiDBLite consensus disorder prediction 67 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01955 Pumo-Chr4 26622717 26623894 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01955 66 116 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 69.231 9.33e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01955 - - gmx:100806962 125.561