Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01951 ATGGAAGCCATCCGAATAATCTCCAACACATCAATCAAGGCACCCAGTCACAGTAACTCGGCCCTGACAATCGATTTAACTCCATGGGATCTCCGATTTCTCACAATTGAAACCATCCGAAGAGGGCTTCTATTTCGCAACGAAAAGCACACAACAAACCAAATCGAGCACCTCCAACACTCCCTTTCATCCACTCTCGCCTTCTTTCCACCCCTCGCAGGCCGTCTTGCCATCGTCCAACATGACGACAACATTGTCTCATCCCACATCGTATGCAACAACGCAGGAGCACTCTTTGTCCACGCCGTCGCAGACAACACCACCGTCGCCGACATTCTTCAACCCAAATACGTTCCTCCCATTGTTCGCTCCTTCTTTCAACCCAACGGCGTTAAAAACTACCAAGGCACGTCACAGCCTTTGTTAGCAGTGCAAGTGACGGAGCTAGTTGACGGCGTCTTCATCAGCATCGCAATCAACCACGTGGTTGCTGACGGCAAGTCGTATTGGCATTTCGTGAATTCCTGGGCTGAAATCTCACGTGGTAACTCTAAAATATCCAAACTCCCTACTCTCCAACGTTGCTTTCTGGATGGCATAGACCGCCCCATACTGTTTCCTTTCACAAAGGAGGACCACTCCTCAAACCTCAATCCTCAAACTCCACCTAAGAGGGTCTTCCATTTCACGAAGGAAAGAATCGCGGAGCTTAAATCAAAAGCCAACGCAGAGGCCAACACCAACAGAATATCTTCCCTGCAAGCGCTTTTAACTCTCCTTTGGCGCTCTGTGATTCGTTGCCAACATGTGGAGCCACAAGAAGAGGTGACTTATGTGCTGATCATTGGCGTTAGACCCAGGATGGTTCCACCACTTGCAGAGGATTATTTCGGAAACGCGGCGCTGGCTGGTCGTGTTACCATGAAAGCAGAGGAACTATTAGAGGGTGGGCTCGGAAAGAGTGCTTTGGAGATGAACAAGCCTGTGGCAGTTCGAAGTGGAGATGCAAATAAAGGTAGCGGAAAGATTACTGTGTTTGCAGGTGCTGAAGAAGGTTCTATTGACATTCATGTGTGCCTTCCTTATGAGATCTTGGAGGCAATGGGAAATGACCCTGAGCTCATGGATGCCACATTTGCTAGTAGTTTGGTTTAG 1155 0.4883 MEAIRIISNTSIKAPSHSNSALTIDLTPWDLRFLTIETIRRGLLFRNEKHTTNQIEHLQHSLSSTLAFFPPLAGRLAIVQHDDNIVSSHIVCNNAGALFVHAVADNTTVADILQPKYVPPIVRSFFQPNGVKNYQGTSQPLLAVQVTELVDGVFISIAINHVVADGKSYWHFVNSWAEISRGNSKISKLPTLQRCFLDGIDRPILFPFTKEDHSSNLNPQTPPKRVFHFTKERIAELKSKANAEANTNRISSLQALLTLLWRSVIRCQHVEPQEEVTYVLIIGVRPRMVPPLAEDYFGNAALAGRVTMKAEELLEGGLGKSALEMNKPVAVRSGDANKGSGKITVFAGAEEGSIDIHVCLPYEILEAMGNDPELMDATFASSLV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01951 384 Gene3D - 205 380 IPR023213 -
Pumo4g01951 384 Gene3D - 2 203 IPR023213 -
Pumo4g01951 384 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 325 375 - -
Pumo4g01951 384 Pfam Transferase family 4 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01951 Pumo-Chr4 26402787 26404101 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01951 58 314 Monolignol Biosynthesis Gene Families AT5G48930 29.851 1.79e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01951 - - gmx:100797643 590.882