Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01948 ATGGAAGCCGTTCGAGTCATCTCCACCACTACAATCAAGGCACCCACTCACAATAACAACGCTAACTCACCTCAGAAAATCGATTTGACTCCCTGGGATCTCCAATTCCTCCCAATTGAAACCATTCAAAAAGGGCTTCTGTTTCGCAACGAAAAGCACACAGACACAGCAAACCAAATCGAGCACCTCCAACACTCCCTTTCCTCCACTCTCGCCTTCTTTCCACCCCTCGCAGGCCGTCTCGCCATCCTCCGACATGACGACAACACTGTCTCATCCCACATCGTATGCAACAACGCAGGAACCCTCTTTGTCCACGCCGTTGCACCCAACACCGCCGTCACCGACATCCTTAAACCCAACTACGTTCCTCCCATTGTCCACCCCTTCTTTCCACTCAACGGAGTTAAAAACTACCAAGGCACGTCACAGCCATTGCTGGCAGTGCAAGTGACGGAGCTACTTGACGGCATCTTCGTCGCCCTCACAATCAACCACGTCGTTGCTGACGGCCAGTCGTTTTGGCATTTCGTCAATTCCTGGGCTGAACTCTCACGTGGTTCCCATAAAATATCCAAAATCCCTGCTTTGGAACGTTGCTTTCTGGATGGCATAGACCGTCCATACGGTTTCCTTTCACAAAGGAGGAAGATACGGTTGCTCAACACCTCATGTCACAATCGCTACATGAGAGGGTCTTCCACTTCACCAAGGAAAAAATCGCGGAACTGA 732 0.5068 MEAVRVISTTTIKAPTHNNNANSPQKIDLTPWDLQFLPIETIQKGLLFRNEKHTDTANQIEHLQHSLSSTLAFFPPLAGRLAILRHDDNTVSSHIVCNNAGTLFVHAVAPNTAVTDILKPNYVPPIVHPFFPLNGVKNYQGTSQPLLAVQVTELLDGIFVALTINHVVADGQSFWHFVNSWAELSRGSHKISKIPALERCFLDGIDRPYGFLSQRRKIRLLNTSCHNRYMRGSSTSPRKKSRN 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01948 243 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 210 - -
Pumo4g01948 243 Pfam Transferase family 4 205 - -
Pumo4g01948 243 Gene3D - 2 203 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01948 Pumo-Chr4 26383937 26384668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01948 63 208 Monolignol Biosynthesis Gene Families AT5G48930 34.899 1.49e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01948 - - gmx:100500257 333.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01948 4 26383937 26384668 Pumo4g01948 4 26383937 26384668 ECH