Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01937 ATGGAAACATCGGAGAATTGCTCTGTCAAAGTCGCTCTTCACATTCGTCCCCTCATTGCCGATGAACGACAACAAGGTTGCATTGAATGTGTTTCCGTTACGCCTTCCAAGCCTCAGGTTCAAATTGGGTCACATTCCTTTACATTTGATTATGTTTATGGAAATGGTGGGTCTCCTTCAGTTGACATGTTTGAGGAATGCGTTGCTCCATTGGTTGATGGCTTATTCCAAGGATACAATGCTACAGTACTTGCCTATGGCCAGACTGGAACTGGGAAAACCTATACCATGGGAACTGGCTATAATGACAATTGTCGGACTGGATTAATTCCTCAGGTTATGAATGCCTTATTCAACAAGATTGAAACACTAAAGCATCAAACAGAATTTCAGTTGCGAGTCTCCTTCATTGAGATTTTGAAGGAAGAGGTGAGGGACTTGTTGGATATGGTATCTATGGGCAAACCAGAAACCTCTAACTCTAATGGCCATTCTGGAAAAATAACTGTTCCTGGGAAGTCACCAATACAAATTCGTGAAACATCAAATGGAGTAATAACACTGGCAGGAATAACTGAAGTTGCTGTAAGTACATTACATGAGATGTCTTCTTACTTGGAGCAGGGTTCTTTAAGCAGGGCAACGGGAAGTACAAATATGAACAACCAATCCAGTCGGTCACATGCCATTTTCACAATTACATTAGAACAGATGCGGAAACTCCATTCTGGTTCTCCCACCAATGACTCTTCAGACGAGGATATGGGTGAAGAATACCTTTCGGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGATGGTGTTCGTTTGAAGGAAGGTATACACATCAATAAAGGTCTTCTTGCTCTTGGTAATGTCATAAGTGCACTAGGGGATGAGAAAAAGCGAAAGGAGGGTGTGCATGTTCCCTATCGGGATAGCAAACTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGTCCTGCTGATATCAATGCTGAGGAAACTCTCAATACTCTCAAGTATGCAAACCGTGCTCGCAATATTCAAAATAAGCCTGTAGTTAATCGAGATTTAATATCCAATGAGATGCAGCAATTGCGCCAGCAGTTGAAGTACTTGCAGGCTGAACTTTGTTCTCGGGGAGGAGCTCCTCCTGATGAAGTGCGGGTTCTTAAGGAAAGGATTTCTTGGCTTGAGTCTACTAATGAGGACCTCTACAGAGAACTTCATGAATATCGCAGTAGATGTGCTTTTGTAGAGAGATGTGAAATTGATGAACCAGATGGACACATTTATCACGTGAAAACCAATGGGCTTGAGAGGCGCTTTCAGAGCTTAGATTCATCTGACCATCCCATGGTTGGAAGTATATCAGGTGAGGATTCTAGGGAAACTGATGAAGCAGCAAAAGAGTTGGAGCATGTACTATTGCAAAATACCATGGACAAAGAGATGAATGAGTTGAATAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATTGCAGTTGATACTGAAACACTCAAACAGCACTTTGGGAAGAAAATTTTGGAACTTGAGGAGGAGAAAAGAAAAGTGCAGGAAGAGAGGGACCATTTATTGCACGAGGTAGAGAATCTTGCTGCTAATTCAGATGGGCTAGCACACAAAACTCAAGATGTTCGTGGCCAAAAGTTGAAGGCTTTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAGTCATGTGCAGCTATTAAAGCAAAAGGAGAAGAGTGAAGAAGCTGCAAAAAGACTGCAGGCTGAGATACAATATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGTGAGAAGGAGCTACTCCAGTTGAAAAAGGAGGGAAGAAAAAATGAGTACGAAAGACATAAGCTTGAGGCTCTAAACCAGCGTCAAAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACGAAAAGGCTAAAAGAATTGTTGGAAGCCCGCAAATCTTCTCCCCGTGACAACTCTGTATATTCAAATGGACATCTACAGCCTGGGCTGGTCAATGAAAAATCCCTCCAAAGGTGGCTTGATCAGGAGCTGGAGGTCATGGTACATGTGCATGAAGTTCGTGCTGAATATGACAAACAAAATCAAGTCCAAGCTGCACTGGAAGAAGAGTTGACTTTACTAAAACAGGATCAGTTTTCAGATGGGCGGAGTATTCCCAAAGCAAAGAGCAAATATTTGAGGCTGTTATCCATGTCACCAGATGCAAAAGTTGAGAGAATAGCTTCTCTTGAGAACATGCTGTGCATGTCTTCAGTTGCTTTGAAAGCCATGGCTTTGCAACTCACTGAGGCAGAAGAAAGGGAACGAACGTTAAATAACCGTGGCCGTTGGAACCAGCTACGCTCAATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAATGCTACTGCAGAAGCAAGGTGCGATTTGTGGGAAAAGAATATGGAACTTAAGGATTTGAAAGGACAACTAAATGAGCTTGTGGCACTGCTACAACAAAGTGAAGCACAGAGAAAAGAACTTGTAAAGGAGCAAAAAATAAAGGTACAAGCTGTTGACATCACATTGGATACACCGGCATTGGAAAACTCACGGTCCTTGAAACACCTTGCGGATGAAATGAGTGGTCCATTATCTCCAATGTCACTTCCTGCACCCAAGCAACTCAAATTCACTCCTGGAGTTGTTAATTGGTCAGTCAGGGAGTCAGCTCCATTTTTAGATGAAGCACGAAAGATGATACCCATTGGAGAGTTGTCAACGAAGAGGCTAGCAGCTATAGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGATGAGACAATTATGAGGTCAAGGCCTCGAGCACACAAGCTTTGA 3081 0.4275 METSENCSVKVALHIRPLIADERQQGCIECVSVTPSKPQVQIGSHSFTFDYVYGNGGSPSVDMFEECVAPLVDGLFQGYNATVLAYGQTGTGKTYTMGTGYNDNCRTGLIPQVMNALFNKIETLKHQTEFQLRVSFIEILKEEVRDLLDMVSMGKPETSNSNGHSGKITVPGKSPIQIRETSNGVITLAGITEVAVSTLHEMSSYLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMRKLHSGSPTNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGVRLKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDLISNEMQQLRQQLKYLQAELCSRGGAPPDEVRVLKERISWLESTNEDLYRELHEYRSRCAFVERCEIDEPDGHIYHVKTNGLERRFQSLDSSDHPMVGSISGEDSRETDEAAKELEHVLLQNTMDKEMNELNKRLEQKESEMKLIAVDTETLKQHFGKKILELEEEKRKVQEERDHLLHEVENLAANSDGLAHKTQDVRGQKLKALEAQILDLKKKQESHVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRKNEYERHKLEALNQRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLQPGLVNEKSLQRWLDQELEVMVHVHEVRAEYDKQNQVQAALEEELTLLKQDQFSDGRSIPKAKSKYLRLLSMSPDAKVERIASLENMLCMSSVALKAMALQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFNATAEARCDLWEKNMELKDLKGQLNELVALLQQSEAQRKELVKEQKIKVQAVDITLDTPALENSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNWSVRESAPFLDEARKMIPIGELSTKRLAAIGQAGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRAHKL 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01937 1026 Gene3D Kinesin motor domain 1 395 IPR036961 -
Pumo4g01937 1026 Coils Coil 375 395 - -
Pumo4g01937 1026 FunFam kinesin-like protein KIN-4A isoform X1 2 395 - -
Pumo4g01937 1026 Coils Coil 808 828 - -
Pumo4g01937 1026 CDD KISc_KIF4 7 368 - -
Pumo4g01937 1026 Coils Coil 677 697 - -
Pumo4g01937 1026 Coils Coil 579 630 - -
Pumo4g01937 1026 Coils Coil 497 524 - -
Pumo4g01937 1026 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g01937 1026 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g01937 1026 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g01937 1026 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g01937 1026 Pfam Kinesin motor domain 16 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g01937 1026 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pumo4g01937 1026 Coils Coil 529 563 - -
Pumo4g01937 1026 Coils Coil 737 764 - -
Pumo4g01937 1026 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g01937 1026 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 398 IPR027417 -
Pumo4g01937 1026 MobiDBLite consensus disorder prediction 155 174 - -
Pumo4g01937 1026 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1015 IPR027640 GO:0003777|GO:0007018
Pumo4g01937 1026 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g01937 1026 Coils Coil 865 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01937 Pumo-Chr4 26226400 26238823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01937 9 400 Calmodulin-binding Proteins AT5G65930 34.596 9.10e-56 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01937 - - gmx:100790341 1903.26