Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01936 ATGAGGAAGATGGAGGAGGCGCACAGGAGTGGGAAGCTGGTGTTCTGCTGCGGGGAGGTGCAGCAGTACACGCTGGAGATGCTGATGAGGGCGTCGGCGGAGTTGTTGGGGAGGGGGAGTGTGGGGACCACCTACAAGGCGGTGCTGGATTCGCGGCTGATCGTGACGGTGAAGAGATTGGACGGAGGGAAAAGTGCGGGGAGTGATGGAGAAGTGTTTGAGCGCCATATGGAGGTTGTGGGTAGGCTTCGCCATCCCAATTTGGTTCCTTTAAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTTGTCATATATGATTATCAACCCAATGGCAGCCTCTTCAACCTCGTTCACGGTTCAAGATCAGCGAGGGCAAAACCCTTGCATTGGACATCATGTTTGAAAATAGCAGAAGATGTGGCACATGGACTTGCTTATATCCATCAAGTTTCATCTCTAATCCATGGCAACCTCAAATCCTCTAACGTCCTTCTTGGGGTGGACTTTGAAGCTTGTATCACGGACTACGGTTTGGCCTTGTTTGCAGATTCTTCATTCTCTGAAGATCCTGATTCTGCGGCCTACAAAGCACCAGAGGCTCGCAGCTCTAGCCGCAGGGCCACTTCTAAGTCTGATGTGTATGCTTTTGGGGTGCTTCTGCTAGAGCTTTTGACGGGTAAACACCCTTCCCAGCACCCTTTTCTTGCACCAAATGATTTGCAAGATTGGGTTAGAGCAATGAGGGATGATGATGGCAGCGAAGACAACCGGCTAGAGATGCTCACGGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCGGAGCAGAGGCCGGCGATGTGGCAAGTCCTTAAGATGATACAGGGAATAAAGGACAGTGTTACAATGGAGGATACTGCACTTACCGGACTCTCATAG 915 0.5148 MRKMEEAHRSGKLVFCCGEVQQYTLEMLMRASAELLGRGSVGTTYKAVLDSRLIVTVKRLDGGKSAGSDGEVFERHMEVVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLIHGNLKSSNVLLGVDFEACITDYGLALFADSSFSEDPDSAAYKAPEARSSSRRATSKSDVYAFGVLLLELLTGKHPSQHPFLAPNDLQDWVRAMRDDDGSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVTMEDTALTGLS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01936 304 Pfam Protein kinase domain 33 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01936 304 Gene3D Phosphorylase Kinase; domain 1 2 107 - -
Pumo4g01936 304 SUPERFAMILY Protein kinase-like (PK-like) 34 291 IPR011009 -
Pumo4g01936 304 ProSiteProfiles Protein kinase domain profile. 30 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01936 304 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 292 IPR046959 -
Pumo4g01936 304 Gene3D Transferase(Phosphotransferase) domain 1 109 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01936 Pumo-Chr4 26221548 26223469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01936 9 297 Receptor kinase-like Gene Family AT3G50230 62.290 3.85e-130 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo4g01936 Pkinase 1.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01936 - - gmx:100783086 570.852