Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01923 ATGAGTCTCCTCCTCTTTCGCGCTCTGATAATCTCATTGGCTCTTCTCCTCGTCACTGTTAACCAATGCTGCGCCCTAAGTAGAGACGGTGTTCTGTTACTTTCTTTCAAGTACGCTGTGTTGAACGACCCACTATACGTCCTCGCAAACTGGAACTACAGTGACGAGACTCCGTGTTCGTGGAACGGAGTTTCTTGTTCCACCGTAGCAGCAACAAACGGTTCCGAATCCCGTGTCACATCATTGTCGCTTCCCAATTCCCAGCTTCTAGGTTCGGTTCCTTCCGATCTGGGTTCCATCGAGCACCTTCAACTTCTCGACCTTTCCAACAACTCCCTCAACGGGTCCTTTCCTTCCTCTCTCTCCCAAGCCTCCGAGCTTCGGTTCCTGAACCTGTCTAATAATTTGATAACAGGTGAGGTTCCGGAGGCCCTATCGCAGCTTCGGAATCTCGAGTACCTTAACCTCTCCGACAATGCCTTGGCGGGAAAATTACCCGACAACTTGTCCAACATGCAAAACCTAACTCTGGCTTCGTTCAAGAACAATTACTTGTTCGGCTTTCTTCCCAGCGGGTTAAGAACGTTGCAGGTGTTGGATCTGTCTTCGAACCTCTTGAACGGGACTCTTCGCCCGGATTTCGGCGGTGACGCCATGAGTTACTTGAACATCTCCTACAACAGATTCTCCGGCGAAATCCCGGCGGACTTTGCGGCGAAGATTCCGGGAAACGCCACCGTTGATCTCTCTTTCAACAATCTCTCCGGCGAGGTTCCTGGCTCCGCTGTGTTTCTGAATCAGAATTCGAAGTCGTTCTCTGGTAACGTCAATCTGTGTGGAGAGCAAACCAATAATCCTTGTCCTATTCCTTCTTCGCCGTCGTCTGAACCGAACGTGTCTGCTCCTACATCTCCTCCTGCAATCGCCGCAATCCCGAAGACGTTTGACGATTCTCCGCTGGCGCCGACGGGGCAGAGACAGAGTGGTCTCAAACGAGGAACGATTATAGGAATCGTGGTGGGGGATGTCGTTGGCGTTGCAATCTTGGCCATGTTGTTTGTCTACGTGTACCGGTTGAAGAAAAAGAAGGACACGGAGGGTGCGATGAAGAACGAAGCGGCTATAACAAGGAGTGGAAGCGAGAGTTCGTCGTCAACAACCTCGGAGTCCAGAGGTTTTACGAGGTGGTCGTGTTTGAGGAAGAGAACGGAAGAGGAAGAGTCTTCCGAGACAACAAGCTCTTGTGATAGTGACGTGGAGGGTGCGGCGAATGAGGGGCAGAACCAGAATCATAAGGGTCCGCAACAAGAGAACAAAACGGGGACTCTTGTTACTGTGGACGGTGAACGACAGCTTGAGCTCGAAACGCTGCTGAAGGCTTCGGCGTACATATTGGGAGCCACGGGTTCCAGCATAATGTACAAGGCAGTGCTCGAAGACGGCACGTCGTTGGCGGTTCGGAGAATCGGGGAGCGTGGCGTGGAGCGGTTCAAGGACTTCGAGAATCAGGTTCGGGTTATTGCTAAACTGGTGCACCCTAATTTGGTTCGCGTTCGTGGCTTCTATTGGGGACACGATGAGAAGCTCATCATCTATGATTTCGTTCCAAAAGGTTGCCTTGCCAATGTTCGTTACAGGAAGGTGGGGTCCTCTCCTAGTCATTTACCGTGGGAAATCCGGCTCAAGATAGCGAAAGGGGTGGCACGTGGGCTGGCTTACCTCCACGAGAAGAAGCACGTGCATGGAAACTTGAAGCCTAGCAATATTCTATTGGGCAACGACATGGAGCCCAAGATTGGAGACTTTGGGCTTGAGAGGATAGTGACGGGTGACACCAGTTATAAGGCTGGCGGGTCCGCGCGTATTTTTGGGAGCAAGAGATCCACGGCGTCACGAGATAGTTTCCAAGACATCACCTTTGGGCCTAGCCCTAGCCCGAGCCCGAGCTCCATAAGTGGCGTGTCTCCTTACCATGCACCCGAGTCACTCAGGAACCTGAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTAATTTTTCTTGAGCTCCTAACGGGGAAGATTGTGGTTTTGGATGATATGGGCCAAGGGCCCGGGCTTTTGGTGGAGGATAAGAACCGGGCCTTGCGAATGGTTGATATGGCTATACGGGCCGACATGGAGGGTAGGGACGAGGCCTTGTTGGCCTACTTCAAGATAGGGTATAGTTGTGTGTCTAGTGTTCCACAGAAAAGGCCTCCAATGAAAGAGGTGCTACAAGTTCTTGAAAAGATCTCGTCCTCTTCGTCTTCTTCATCCTCATATTATTATAGCGTCTAA 2322 0.5159 MSLLLFRALIISLALLLVTVNQCCALSRDGVLLLSFKYAVLNDPLYVLANWNYSDETPCSWNGVSCSTVAATNGSESRVTSLSLPNSQLLGSVPSDLGSIEHLQLLDLSNNSLNGSFPSSLSQASELRFLNLSNNLITGEVPEALSQLRNLEYLNLSDNALAGKLPDNLSNMQNLTLASFKNNYLFGFLPSGLRTLQVLDLSSNLLNGTLRPDFGGDAMSYLNISYNRFSGEIPADFAAKIPGNATVDLSFNNLSGEVPGSAVFLNQNSKSFSGNVNLCGEQTNNPCPIPSSPSSEPNVSAPTSPPAIAAIPKTFDDSPLAPTGQRQSGLKRGTIIGIVVGDVVGVAILAMLFVYVYRLKKKKDTEGAMKNEAAITRSGSESSSSTTSESRGFTRWSCLRKRTEEEESSETTSSCDSDVEGAANEGQNQNHKGPQQENKTGTLVTVDGERQLELETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGERGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPKGCLANVRYRKVGSSPSHLPWEIRLKIAKGVARGLAYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDITFGPSPSPSPSSISGVSPYHAPESLRNLKPHPKWDVYSFGVIFLELLTGKIVVLDDMGQGPGLLVEDKNRALRMVDMAIRADMEGRDEALLAYFKIGYSCVSSVPQKRPPMKEVLQVLEKISSSSSSSSSYYYSV 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01923 773 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Pumo4g01923 773 SUPERFAMILY L domain-like 28 280 - -
Pumo4g01923 773 ProSiteProfiles Protein kinase domain profile. 459 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01923 773 MobiDBLite consensus disorder prediction 395 409 - -
Pumo4g01923 773 PRINTS Leucine-rich repeat signature 103 116 - -
Pumo4g01923 773 PRINTS Leucine-rich repeat signature 193 206 - -
Pumo4g01923 773 SUPERFAMILY Protein kinase-like (PK-like) 464 757 IPR011009 -
Pumo4g01923 773 Gene3D Transferase(Phosphotransferase) domain 1 536 771 - -
Pumo4g01923 773 MobiDBLite consensus disorder prediction 284 327 - -
Pumo4g01923 773 FunFam Leucine-rich repeat receptor-like protein kinase 195 289 - -
Pumo4g01923 773 Pfam Leucine Rich repeats (2 copies) 126 169 IPR025875 -
Pumo4g01923 773 FunFam Os07g0541700 protein 548 625 - -
Pumo4g01923 773 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 79 758 - -
Pumo4g01923 773 MobiDBLite consensus disorder prediction 634 656 - -
Pumo4g01923 773 MobiDBLite consensus disorder prediction 375 394 - -
Pumo4g01923 773 CDD STKc_IRAK 465 759 - -
Pumo4g01923 773 MobiDBLite consensus disorder prediction 634 657 - -
Pumo4g01923 773 Gene3D Phosphorylase Kinase; domain 1 425 534 - -
Pumo4g01923 773 MobiDBLite consensus disorder prediction 373 441 - -
Pumo4g01923 773 MobiDBLite consensus disorder prediction 414 441 - -
Pumo4g01923 773 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 26 188 - -
Pumo4g01923 773 Gene3D Ribonuclease Inhibitor 194 289 IPR032675 -
Pumo4g01923 773 Gene3D Ribonuclease Inhibitor 27 193 IPR032675 -
Pumo4g01923 773 Pfam Protein kinase domain 465 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01923 Pumo-Chr4 26068694 26072111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01923 9 771 Receptor kinase-like Gene Family AT4G37250 59.027 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo4g01923 Pkinase 1.2e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01923 - - gmx:100776204 1246.49