Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01903 ATGACCTTCATCAGGGAGGATGATGAAGTTGATGATCATGTGGATGGAGGATCACAGACCAATGCCAACTCTGAAATTGTGACCCCTGATGGTGATCATAACTTGGGAGAATGGCTGAGTTTAGGCCTCAAAGGAGACATGCCTCTGGAAGCAACAGCAGAACAAAACTCATCATCAAAGCCTCTCCACAACAAGGTATTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGCTCACAAGCCTTAGGGGGTCACCAGAATGCACACAAGAGAGAAAGAGAAGCAGCTAGAAGCTACCAATCTCACAGGATGATGACATCATCATCATCAATGGAGCTTGCCTACACTTCTCTGGCATCTAGGTCACTGGGAATACAGCCTCACTCTCTTGTGCACAAGCCAAACAGAGAAAGGTCTGCTATGGTGGCTAGATTCAGTGATGCCAATAACAGTAATTATGGGGTAGGAGTGGCATCATGGACACCCTTTATGCTTGAACAAGCTGTGGATTTCTATTGGCCTGGTAGCTTTCGGGTGGACTTGCCTAAGCAAGAATCAGATGTTAAGAAGATTGACTTAGATCTTCGGCTCTGA 594 0.4562 MTFIREDDEVDDHVDGGSQTNANSEIVTPDGDHNLGEWLSLGLKGDMPLEATAEQNSSSKPLHNKVFSCNFCMRKFYSSQALGGHQNAHKREREAARSYQSHRMMTSSSSMELAYTSLASRSLGIQPHSLVHKPNRERSAMVARFSDANNSNYGVGVASWTPFMLEQAVDFYWPGSFRVDLPKQESDVKKIDLDLRL 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01903 197 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Pumo4g01903 197 MobiDBLite consensus disorder prediction 1 15 - -
Pumo4g01903 197 MobiDBLite consensus disorder prediction 1 31 - -
Pumo4g01903 197 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 94 IPR013087 -
Pumo4g01903 197 SUPERFAMILY beta-beta-alpha zinc fingers 63 94 IPR036236 -
Pumo4g01903 197 Gene3D Classic Zinc Finger 46 122 - -
Pumo4g01903 197 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01903 Pumo-Chr4 25766609 25767620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01903 17 188 C2H2 Transcription Factor Family AT1G24625 37.356 5.15e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01903 - - ccaj:109809498 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01903 4 25766609 25767620 Pumo4g01903 4 25766609 25767620 ECH