Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01885 ATGGGTTCGTTTCGTAAACCTTTCGCTGCAGTTCTCTTGGTTCTGTTTCTGGGCCTCTCCGGTGCGGCCGAACCGGAGAAGAGTACTTACATTGTACACGTGGCGAAATCGGAAATGCCGGAGAGCTTCGAGCACCACACGGTGTGGTACGAGTCGTCGCTGAAGAGCGTGTCTGACTCGGCGGAAATGATGTACACCTACGACAACGCGATCCACGGATACGCGACGAGGCTGACCGCCGAGGAAGCGCGTTTGCTCGAGAGCCAAACAGGGATTCTGGCGGTGCTGCCCGAGATGAGGTACGAGCTTCATACGACGAGGACGCCTTTGTTCCTCGGACTCGACAAGAGCGCGGATTTGTTTCCTGAGTCTAGTTCGGGGAATGACGTCATCGTCGGAGTCCTCGACACTGGTGTTTGGCCCGAGAGCAAGAGCTTCGACGACACGGGACTTGGACCTGTTCCGAGTAGCTGGAAAGGCGAGTGCGAAACGGGAACAAACTTCAGCGCCTCGAACTGCAACAGAAAGTTGATTGGAGCGAGGTTCTTCCCGAAGGGTTGCGAGGCCTTGCTGGGTCCGATTAACGAAACCGAGGAGTCTAGATCCCCGCGCGACGACGACGGCCACGGCACCCACACGGCCAGCACCGCCGCGGGGTCGGTGGTTTCCGGCGCGAGCTTGTTCGGGTACGCTTCCGGGACGGCGCGTGGGATGGCCACGCACGCGAGAGTGGCTGCCTACAAGGTTTGCTGGAAGGGAGGGTGCTTCAGCTCCGACATTCTTGCCGCGATTGAGAGGGCGATATTGGACAACGTTAATGTTTTGTCGTTGTCGCTCGGTGGTGGAATGGCGGATTATTACAGAGACAGTGTCGCTATTGGAGCTTTTTCGGCGATGGAGAAAGGGATTTTAGTTTCTTGCTCCGCTGGGAACGCGGGTCCCAGTCCTTACAGTCTCTCCAATGTGGCACCATGGATTACTACCGTAGGCGCTGGCACACTGGATCGTGACTTCCCTGCTTATGTTGCGCTCGGGAATGGACTTAACTTCTCCGGTGTGTCGCTCTATCGTGGTAACGCTTTGCCCGATTCTCCTTTACCGTTTGTTTATGCAGGGAATGTGAGCAACGCTATGAATGGGAACTTGTGCGTGACGGGAACCTTGTTGCCGGAGAAAGTTGCCGGGAAGATTGTGTTGTGTGATCGTGGATTAACTGCTAGGGTTCAGAAAGGTTCGGTGGTGAAAGCCGCCGGAGCTTTGGGGATGGTGTTGAGCAACACCGCCGCGAACGGCGAGGAGCTGGTGGCGGATGCTCATCTCTTGCCGGCGACCGCGGTTGGGCAGAAGGCCGGTGACGCGATCAAGAAGTATTTGTTCTCCGACGCGAAACCGACGGTGAAGATTTTGTTCGAGGGGACGAAGGTGGGGATTCAGCCATCGCCGGTGGTTGCGGCGTTTAGCTCAAGAGGTCCTAATTCGATCTCGCCTCAGATTCTGAAACCAGATCTGATCGCGCCAGGTGTCAACATCTTAGCGGGGTGGTCCAAGGCAGTGGGTCCCACCGGTTTGCCCGTTGATGGCAGGCGCGTCGATTTCAACATCATCTCTGGCACTTCCATGTCCTGCCCTCACGTGAGCGGTCTAGCCGCGTTTATCAAATCGGCTCACCCTGAGTGGAGCCCAGCCGCGGTTCGGTCGGCTCTCATGACAACGGCTTACACCGTTTACAAGACCGGTGAGAAGTTGCAAGACAGTGCAACGGGAAAACCCTCCACGCCGTTCGATCACGGCGCGGGACACGTGGACCCTGTCGCAGCGCTTAACCCAGGACTCGTTTATGATTTGACGGTGGATGATTACTTGGGTTTTCTCTGCGCGCTAAACTACTCAGCCTCTGAAATCAATACCCTGGCCAAGAGAAAATTCCAGTGCGACGCGAGCAAGCAATACAGTGTGAATGACCTCAACTACCCTTCGTTTGCGGTGTTGTTTGAATCAGGGAGTGGGTCCGGCGTAGTGAAACACACGCGAACTCTCACAAATGTGGGGCCCGCGGGAACGTACAAGGCTTCAGTGACGTCAGACACTGCATCCGTGAAAATCTCGGTTGAACCGCAAGTGCTGAGTTTCAAGGAAAATGAGAAAAAATCATTCACCGTCACGTTTTCGTCCTCGGGTTCGCCACAGCAGAGAGTGAATGCTTTTGGACGGTTGGAATGGTCTGATGGGAAGCACGTGGTTGGAACCCCTATTTCCATAAATTGGGGTTGA 2271 0.5561 MGSFRKPFAAVLLVLFLGLSGAAEPEKSTYIVHVAKSEMPESFEHHTVWYESSLKSVSDSAEMMYTYDNAIHGYATRLTAEEARLLESQTGILAVLPEMRYELHTTRTPLFLGLDKSADLFPESSSGNDVIVGVLDTGVWPESKSFDDTGLGPVPSSWKGECETGTNFSASNCNRKLIGARFFPKGCEALLGPINETEESRSPRDDDGHGTHTASTAAGSVVSGASLFGYASGTARGMATHARVAAYKVCWKGGCFSSDILAAIERAILDNVNVLSLSLGGGMADYYRDSVAIGAFSAMEKGILVSCSAGNAGPSPYSLSNVAPWITTVGAGTLDRDFPAYVALGNGLNFSGVSLYRGNALPDSPLPFVYAGNVSNAMNGNLCVTGTLLPEKVAGKIVLCDRGLTARVQKGSVVKAAGALGMVLSNTAANGEELVADAHLLPATAVGQKAGDAIKKYLFSDAKPTVKILFEGTKVGIQPSPVVAAFSSRGPNSISPQILKPDLIAPGVNILAGWSKAVGPTGLPVDGRRVDFNIISGTSMSCPHVSGLAAFIKSAHPEWSPAAVRSALMTTAYTVYKTGEKLQDSATGKPSTPFDHGAGHVDPVAALNPGLVYDLTVDDYLGFLCALNYSASEINTLAKRKFQCDASKQYSVNDLNYPSFAVLFESGSGSGVVKHTRTLTNVGPAGTYKASVTSDTASVKISVEPQVLSFKENEKKSFTVTFSSSGSPQQRVNAFGRLEWSDGKHVVGTPISINWG 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01885 756 FunFam Subtilisin-like protease SBT1.9 19 104 - -
Pumo4g01885 756 SUPERFAMILY Subtilisin-like 103 611 IPR036852 GO:0004252|GO:0006508
Pumo4g01885 756 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Pumo4g01885 756 Gene3D Peptidase S8/S53 domain 129 620 IPR036852 GO:0004252|GO:0006508
Pumo4g01885 756 CDD Peptidases_S8_3 101 573 IPR034197 -
Pumo4g01885 756 Gene3D - 335 476 - -
Pumo4g01885 756 ProSiteProfiles Serine proteases, subtilase domain profile. 100 607 - -
Pumo4g01885 756 MobiDBLite consensus disorder prediction 194 216 - -
Pumo4g01885 756 SUPERFAMILY PA domain 389 455 IPR046450 -
Pumo4g01885 756 Pfam Peptidase inhibitor I9 29 104 IPR010259 -
Pumo4g01885 756 Gene3D - 624 755 - -
Pumo4g01885 756 Pfam Fibronectin type-III domain 654 753 IPR041469 -
Pumo4g01885 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 104 IPR037045 -
Pumo4g01885 756 Pfam PA domain 383 454 IPR003137 -
Pumo4g01885 756 Pfam Subtilase family 127 583 IPR000209 GO:0006508|GO:0008236
Pumo4g01885 756 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Pumo4g01885 756 PRINTS Subtilisin serine protease family (S8) signature 127 146 IPR015500 -
Pumo4g01885 756 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Pumo4g01885 756 CDD PA_subtilisin_like 341 468 - -
Pumo4g01885 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 752 IPR045051 -
Pumo4g01885 756 FunFam Subtilisin-like protease SBT1.5 129 348 - -
Pumo4g01885 756 FunFam subtilisin-like protease SBT1.5 335 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01885 Pumo-Chr4 25499739 25502797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01885 10 755 Subtilisin-like Serine Gene Family AT5G67360 72.267 0.0 1126