Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01873 ATGACGCAATTCACAACCCCACTCCCTCCTCTGCACCAAATCACACCCTCCCTCCCCAACCCTACTACCATGAACAAAAACCAAATCCCTAGGCCTAGGCCTTGGCCTGCAGGCTTCCCTACCTCCAAGGCCATAACCAACTTCGGCGATGCTAACTGCATGGAACAGTTACTCGTTCACTGTGCCAACGCTATTGAAACCAACGATGTAACCCTCGCACAGCAGATCCTTTGGGTTCTTAACAATATAGCCCCTCCCGATGGCGACTCCAACCAACGCCTCGCCTCCAGCTTCCTCCGCGCCCTCACTGCACGCGCGGCCCAAACCGGCACCTGCAAGATGCTCGTCGCCGTAGCGGATCACAACCCCTCCAACCTCACCATAGACACGCACAAATTCTCCGTCATCGAGCTCGCCAACTTCGTCGACCTAACTCCGTGGCACCGCTTCGGCTTCACCGCCGCCAACACCGCCGTTCTAGAAGCCACCGAGGGCTTCTCCGTCATCCACATCGTCGACCTAAGCTTGACGCATTGCATGCAGATTCCCACGCTCATCGACGCCATCGCCAGCCGCCACGAGGTGCCGCCGCTGATCAAGCTCACGGTGGCCGACGCTAGCTGCAGGGACATCCCGCCCATGCTCGACCTCTCCTACGACGAGCTCGGCGCCAAGCTCGTGAACTTCGCTCGCTCCAGAAACGTGGTCATGGAATTCAGAGCTGGTCTCTTCCACCTATCAAGACGGGTTCGCAGGTTTGATCGATCATTTAAGAGTGCAACAACAACAGCAACACTTCGTTTATGCAGCAGAGCCTCGTCCGAGTGA 828 0.5737 MTQFTTPLPPLHQITPSLPNPTTMNKNQIPRPRPWPAGFPTSKAITNFGDANCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPPDGDSNQRLASSFLRALTARAAQTGTCKMLVAVADHNPSNLTIDTHKFSVIELANFVDLTPWHRFGFTAANTAVLEATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVPPLIKLTVADASCRDIPPMLDLSYDELGAKLVNFARSRNVVMEFRAGLFHLSRRVRRFDRSFKSATTTATLRLCSRASSE 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01873 275 MobiDBLite consensus disorder prediction 1 29 - -
Pumo4g01873 275 ProSiteProfiles GRAS family profile. 45 275 IPR005202 -
Pumo4g01873 275 MobiDBLite consensus disorder prediction 1 36 - -
Pumo4g01873 275 Pfam GRAS domain family 54 241 IPR005202 -
Pumo4g01873 275 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 53 245 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01873 Pumo-Chr4 25365896 25366723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01873 36 260 GRAS Transcription Factor Family AT3G49950 56.410 1.52e-82 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo4g01873 GRAS 2.3e-44 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01873 - - gmx:100814364 399.823