Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01866 ATGAAAGCTCATCATCATCATCATTTGAGCTTCTTTTTGATCCTATCATTGTTGTCTCTATTCCCCACTCTCAAAGCTACCAACACAACTCAATTCTCAGTTCACAATGAAACAACAAGAAGGATTCTCCACCAGCCTCTGTTCCCGGCGGTCTCAGCTCCGCCGCCGGTTACTCCGCCACCACCGCCGCCGCCGGATATTCCGTCTTCTCCCGACATTCCTTTCTTCAATGAGTATCCGGCCGGGCAGCCGCCGCCGGTGCAGAACCTGCCGCCGGCGACGACCTCCAGCGGCGTGATCTCGAACCCGACGGCGACGCAGCCCACGAAACCGGCGAAGAAGGTGGCGATTGCGATCTCCGTGGGAATTGTGACGCTGGGAATGTTCTCTGCATTGGGATTCTTCTTATACAGGCACAGAGTAAGACACCCGGCGGAGACACAGAAACTCGTTTCTCGGAGGGTTCTAGAAGATTCTCCGCGGGCCCCACCACCACCCTCGAGCTTCCTCTACATTGGGACGGTGGAGCCCGCCAGAACGTCGCTCAGCGAACCCAATGGAACGAACATTAACACTTCGCCTTATCGAAAGCTTGATTCCATTAAGCTTAACTCCGATCACCGTTACCGCCCCAGTCCCGAGTTGCAGCCATTGCCGCCGCCGCACAAGCCGCCCGACGAGAGCCACTCGCCGCCGGCGGAATTCTCCGACTCCTCGTCTTCCGAGGAGGAAAGCTGCGAGACGGCGTTTCACTCGCCGCACGGCTCGTCGCTCGGCCGCGAAGAGAATTTTTTCACGCCGGTTTCGCGCCACAGTTGTCTCTCCGCCGCCGCACCGCCGGCGGCTGCTCCGGTGATTCCTTTCTCGAAGAGAACTTCGCCGAAATCCCGGTTTTCCGCTCCGTCGCCGGAAATCAGAAACATGGTCGTACCATCCGTTATGCCTTCTCCGGCGCCGGCAGCATCAACAAAATATCAGCACGTGGAGAAAGAAATGACTTTGGGTCCTTCTAGAAGGCCGAAATTCTCATCGCATCCCCCAGCACCGAATTTGACTCATCTTCATTCAAACGAGTCCACGGCTTCACTTAAGCCGCCGCCGCCTCCTCCTCCTCCGCCACCACCGCCGCCGCCACTTCCGTCGCGAAAGGGTTGGTCTCCGTCAATTAGTGCATCTTCGTCCTCTGTGTCAAGGAAGCGCCAAGAGTCTTGGTCCCCAAATGAAGGAGGGTCTTCTGCTAACAGTGTTAGTGTAAGGAAAGGTTCTTCGGAGGAAGTTGAGAAACGGCGTGAAGGTGATGACGTGGATGGAGCAAAACCCAAGTTGAAAGCTCTGCATTGGGATAAAGTGTCTGCTACTTCGGACCGTGCCACTGTGTGGGACCAGTTAAAATCCAGCTCCTTTCAGTAA 1410 0.561 MKAHHHHHLSFFLILSLLSLFPTLKATNTTQFSVHNETTRRILHQPLFPAVSAPPPVTPPPPPPPDIPSSPDIPFFNEYPAGQPPPVQNLPPATTSSGVISNPTATQPTKPAKKVAIAISVGIVTLGMFSALGFFLYRHRVRHPAETQKLVSRRVLEDSPRAPPPPSSFLYIGTVEPARTSLSEPNGTNINTSPYRKLDSIKLNSDHRYRPSPELQPLPPPHKPPDESHSPPAEFSDSSSSEEESCETAFHSPHGSSLGREENFFTPVSRHSCLSAAAPPAAAPVIPFSKRTSPKSRFSAPSPEIRNMVVPSVMPSPAPAASTKYQHVEKEMTLGPSRRPKFSSHPPAPNLTHLHSNESTASLKPPPPPPPPPPPPPPLPSRKGWSPSISASSSSVSRKRQESWSPNEGGSSANSVSVRKGSSEEVEKRREGDDVDGAKPKLKALHWDKVSATSDRATVWDQLKSSSFQ 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01866 469 MobiDBLite consensus disorder prediction 275 443 - -
Pumo4g01866 469 MobiDBLite consensus disorder prediction 180 199 - -
Pumo4g01866 469 MobiDBLite consensus disorder prediction 180 263 - -
Pumo4g01866 469 MobiDBLite consensus disorder prediction 385 420 - -
Pumo4g01866 469 SUPERFAMILY Formin homology 2 domain (FH2 domain) 367 468 - -
Pumo4g01866 469 PANTHER FORMIN-RELATED 11 469 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pumo4g01866 469 MobiDBLite consensus disorder prediction 49 69 - -
Pumo4g01866 469 MobiDBLite consensus disorder prediction 232 252 - -
Pumo4g01866 469 ProSiteProfiles Formin homology-2 (FH2) domain profile. 432 469 IPR015425 -
Pumo4g01866 469 MobiDBLite consensus disorder prediction 421 443 - -
Pumo4g01866 469 MobiDBLite consensus disorder prediction 362 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01866 Pumo-Chr4 25212785 25214626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01866 33 313 FH2 protein (formin) Gene Family AT5G67470 50.163 3.69e-64 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01866 - - gmx:100776403 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01866 4 25212785 25214626 Pumo4g01866 4 25212785 25214626 ECH
Pumo8g02027 8 57160550 57165892 Pumo4g01866 4 25212785 25214626 PCT