Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01861 ATGGATACCTTGTTTAGGCTAGTAAGTTTTCATCAGCAACAACAACAACAACAACCCGATCCATCCCTCAACTCCACGACCAGCAGAACCTCGAGCAGCTCCAGATCCTCTAGACAAAACTACTACCACTATTCCTCCCATCAAGAAGACGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACCTATCCTCGTCTTCTTCCAAACACTACTACCCATACCAACCCCACGTATCCACCACTACTACTAACACCACCACCAACACCGATTACTCCTACTCCTTCTCCCCCACCCCACCACCCGTTCAAGACTTCAACTTTGAATTCTCCCCCAACTGGTCCCACAACCTCCTCCTCGAATCAGCACGCGCCCTCTCCGACAACAACACCACGCGCCTCCACCACCTCCTCTGGATGCTCAACGAACTCAGCTCCCCCTACGGCGACACCGACCAAAAGCTCGCCGCGTACTTCCTCCAAGCCCTCTTCAGCCGCGTCACCGACGCTGGAGACCGAACCTACCGAACCTTAGCCTCGGCCTCCGAGAAAACATGCTCCTTCGAGTCCACAAGGAAGACGGTCCTAAAATTCCAAGAAGTCAGCCCCTGGACGACCTTCGGACACGTGGCGTCCAACGGAGCAATCCTAGAAGCCTTAGAGGGAAACCCCAAATTGCACATACTTGACATCAGCAACACCTATTGCACCCAATGGCCAACCCTTCTAGAAGCATTGGCAACGCGAAGCGACGAGACGCCACACCTCCGTTTAACCACCGTTGTCACCGGACGAACCGGTAGCTCCGTCCAGCGCGTCATGAAGGAAATCGGGACGCGGATGGAGAAATTCGCGCGCCTCATGGGCGTTCCGTTCAAGTTCAACGTCGTTCACCTCCAAGGCGATCTCTCGGAGTTTAATTTCTCCGAGCTCGACATCAAGGAGGACGAGGCTTTGGCCGTGAACTGCGTGAACGCGCTGCATTCTGTTTCCGCGGCCGGGAACAACCGCCACGCGTTGATATCGGCGCTGCAAGGGCCTGCAGCCGCGGATTGTGACGGTGGTGGAGGAGGAGGCTGA 1077 0.5497 MDTLFRLVSFHQQQQQQQPDPSLNSTTSRTSSSSRSSRQNYYHYSSHQEDEECFNFYMDEEDLSSSSSKHYYPYQPHVSTTTTNTTTNTDYSYSFSPTPPPVQDFNFEFSPNWSHNLLLESARALSDNNTTRLHHLLWMLNELSSPYGDTDQKLAAYFLQALFSRVTDAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGNPKLHILDISNTYCTQWPTLLEALATRSDETPHLRLTTVVTGRTGSSVQRVMKEIGTRMEKFARLMGVPFKFNVVHLQGDLSEFNFSELDIKEDEALAVNCVNALHSVSAAGNNRHALISALQGPAAADCDGGGGGG 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01861 358 MobiDBLite consensus disorder prediction 8 44 - -
Pumo4g01861 358 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 77 330 IPR005202 -
Pumo4g01861 358 ProSiteProfiles GRAS family profile. 105 358 IPR005202 -
Pumo4g01861 358 MobiDBLite consensus disorder prediction 8 43 - -
Pumo4g01861 358 Pfam GRAS domain family 116 333 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01861 Pumo-Chr4 25160877 25161953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01861 1 344 GRAS Transcription Factor Family AT4G37650 56.136 3.65e-128 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo4g01861 GRAS 7.9e-64 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01861 - - gmx:100778524 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01861 4 25160877 25161953 Pumo4g01861 4 25160877 25161953 ECH
Pumo8g02040 8 57268843 57270829 Pumo4g01861 4 25160877 25161953 PCT