Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01860 ATGCTGGAGCGCGCGGCAGGGCGGGCGGTGGTGGACCTGGTGGCGTGCTCGCCGGCGGAGTCCGTGGAGCGCCGCGAGACCGCAGCACGGTGGGCGGCGAGGCTTCATGGTGGAGGGCTAAACGCGGTGCCGTTTAGCGAGGAGGTTTGCGACGACGTGAGGGCGCTGTTGAGGAGGTACAAGGAGGGGTGGTCCATGGCGGCGTGCTCCGACGCCGGAATATTCCTTTCGTGGAAGGAGACGCCGGTGGTGTGGGCCAGTGCATGGAGGCCCTAA 276 0.6812 MLERAAGRAVVDLVACSPAESVERRETAARWAARLHGGGLNAVPFSEEVCDDVRALLRRYKEGWSMAACSDAGIFLSWKETPVVWASAWRP 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01860 91 ProSiteProfiles GRAS family profile. 1 90 IPR005202 -
Pumo4g01860 91 Pfam GRAS domain family 3 90 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01860 Pumo-Chr4 25160480 25160755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01860 1 91 GRAS Transcription Factor Family AT4G37650 69.892 1.06e-38 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo4g01860 GRAS 5.1e-19 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01860 - - gmx:100814082 176.792