Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01837 ATGCTCTCCACTCTCCCTCCCTCCGACCCCTTCTCCGCCTTCTCCGGCGGCTTCACGCCCTGGGAAGAAGACGACTCCAACCTCCTCTTCTCCCCCAAACCCGTCACTTCCAGCTCCGGCTCCGACGACCCCAACCAAAGCCCCGAGAAAACCGAACCGAACCAACACGTGGCCGTGTCAGTGATGGACGAGCGGAAACGGCGCCGCATGATATCGAACCGGGAATCGGCCCGCCGGTCCAGGATGCGAAAACAGAGACACCTCGAGAACCTTCGGAACCAGTTGAACAAGTGCAGGGTCGAAAACCGCGAACTCAGTAACCGGTTGCAGTTCGTCCTGCACCACTTGAACCGCCTCCGAACCGAAAACGAATGGCTCCGCTCCGAGCGAACCCTCCTCCGCCAAAAAGTCGCCAACTTAACCCAAATTTTGATTTTCCAACAATTCCAAACCTTCCCCCCTGCATGGACATGCACCAACACCTCGCTCATGACAATTAATCAAGTTAATTAA 513 0.5634 MLSTLPPSDPFSAFSGGFTPWEEDDSNLLFSPKPVTSSSGSDDPNQSPEKTEPNQHVAVSVMDERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELSNRLQFVLHHLNRLRTENEWLRSERTLLRQKVANLTQILIFQQFQTFPPAWTCTNTSLMTINQVN 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01837 170 MobiDBLite consensus disorder prediction 1 85 - -
Pumo4g01837 170 CDD bZIP_plant_GBF1 66 117 IPR045314 GO:0003700|GO:0006355
Pumo4g01837 170 SMART brlzneu 61 125 IPR004827 GO:0003700|GO:0006355
Pumo4g01837 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 68 83 IPR004827 GO:0003700|GO:0006355
Pumo4g01837 170 MobiDBLite consensus disorder prediction 30 54 - -
Pumo4g01837 170 SUPERFAMILY Leucine zipper domain 65 116 IPR046347 GO:0003700|GO:0006355
Pumo4g01837 170 MobiDBLite consensus disorder prediction 59 78 - -
Pumo4g01837 170 PANTHER BZIP TRANSCRIPTION FACTOR 44 34 147 - -
Pumo4g01837 170 Gene3D - 63 144 - -
Pumo4g01837 170 FunFam BZIP transcription factor 63 114 - -
Pumo4g01837 170 Coils Coil 74 136 - -
Pumo4g01837 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 63 126 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01837 Pumo-Chr4 24921722 24922617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01837 1 153 bZIP Transcription Factor Family AT2G22850 35.484 1.35e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01837 - - gmx:100809244 270.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02056 8 57412208 57413048 Pumo4g01837 4 24921722 24922617 PCT