Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01817 ATGGTCTATATCTTTGCTTATGGACAGACAGGTTCAGGCAAAACCTATAAAATGATGAGTAGGCCTGATGCCCCCGAGCTGAAGGGGTTGATACCACGTTCTCTAGAACAGATATTCGAGATTAGTCAGTCCCTGAAAGATCAGGGGTGGGAGTATAAAATGCAGGGATTTGTTACCATCAAATCGATCAAGTGGCATTGA 201 0.4378 MVYIFAYGQTGSGKTYKMMSRPDAPELKGLIPRSLEQIFEISQSLKDQGWEYKMQGFVTIKSIKWH 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01817 66 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 54 IPR027417 -
Pumo4g01817 66 Gene3D Kinesin motor domain 1 59 IPR036961 -
Pumo4g01817 66 ProSiteProfiles Kinesin motor domain profile. 1 66 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pumo4g01817 66 PANTHER KINESIN-LIKE PROTEIN KLP-3 2 54 IPR027640 GO:0003777|GO:0007018
Pumo4g01817 66 Pfam Microtubule binding 2 56 IPR031852 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01817 Pumo-Chr4 24512284 24512788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01817 2 41 Calmodulin-binding Proteins AT5G65930 50.000 1.55e-06 41.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01817 K10405 - gmx:100808278 102.064