Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo4g01816 | ATGCTCTTGAGGGAGACGTGTTCTTCTCAAAGGGACCAAATAAATATGCTGCAACAGCTGTTGATTGTTGAAAAGGAGAAGTTAAAGATAGCTGATTTAACTGCTTCAGAAATAAGAACAGTGTCTGAAGACCAGAAAAGAATTATACGTGAACTCCAGGAACGACTGGCAGAGAAAGAATTCCAAGTAATTGAAGGGGATAAGATAAGGAAAAAAATGCACAACAGTATCCTGGAGCTAAAAGGAAATATTCGCGTGTTCTGCCGTGTCCGACCTTTGCTACCGGATGATCCTGGAACAGACATGGCTGTTTCTTATCCCACGTCAATGGAATTATGGAAGCTCTTTGCCGGGGCATTCGATTGA | 366 | 0.4208 | MLLRETCSSQRDQINMLQQLLIVEKEKLKIADLTASEIRTVSEDQKRIIRELQERLAEKEFQVIEGDKIRKKMHNSILELKGNIRVFCRVRPLLPDDPGTDMAVSYPTSMELWKLFAGAFD | 121 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo4g01816 | 121 | Gene3D | Kinesin motor domain | 23 | 112 | IPR036961 | - | |
Pumo4g01816 | 121 | ProSiteProfiles | Kinesin motor domain profile. | 83 | 121 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Pumo4g01816 | 121 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 44 | 101 | IPR027417 | - | |
Pumo4g01816 | 121 | PANTHER | KINESIN-LIKE PROTEIN KLP-3 | 7 | 106 | IPR027640 | GO:0003777|GO:0007018 | |
Pumo4g01816 | 121 | Pfam | Microtubule binding | 66 | 109 | IPR031852 | GO:0008017 | |
Pumo4g01816 | 121 | Coils | Coil | 42 | 62 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo4g01816 | Pumo-Chr4 | 24508804 | 24511373 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo4g01816 | 37 | 93 | Calmodulin-binding Proteins | AT5G65930 | 39.062 | 1.85e-06 | 43.5 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo4g01816 | K10405 | - | gmx:100818473 | 182.956 |