Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01814 ATGCGACTCCTCTTCCTCTTCCTCTTCCTCTTCCTCCACTTCCATTTTCACTTACTCCACGCAGCCCACGTCTCAGAGTACCGCGCGCTCCTCTCTTTCAAATCCTCCTCCGTAACCGATGACCCCACCCATGCCCTCTCCTCGTGGAACTCCTCCACCCCGTTATGCTCCTGGTTCGGCGTCACGTGCGACTCGCGCCGGCACGTGACGAGCCTCAACCTGACCTCGTTGTCTCTCTCTGGCACCCTCTCCGACGACCTCTCCCACCTCCCGTTTCTCTCGAATCTCTCCCTCGCCGACAACAAGTTCTCTGGTCCCATTCCCGCCTCCCTCTCCGTCCTCTCCGGCCTCCGCTTCCTCAACCTCTCTAACAATGTCTTCAACGCCACCTTCCCTTCCCCGCTTGCGCGCCTCGCTAATCTCCAAGTCCTCGACCTCTACAACAACAACATGACTGGACCTCTTCCTCTCTCCGTCACCGCCATGCCCCTCCTCCGTCACCTACACCTTGGCGGCAACTTCTTCTCCGGCCAGATCCCTCCTGAGTACGGCACCTGGCAGCACCTCCAATACCTAGCCCTCTCCGGCAACGAGCTCGCCGGCAACATCCCGCCAGAGCTCGGAAACCTCACTGCCCTCCGCGAACTCTACATTGGCTACTTCAACACTTACTCCGGCGGCATCCCGCCGGAAATCGGAAACCTGTCCGAGCTCGTCCGGCTCGACGCTGCCTACTGCGGACTCTCCGGCGAGATTCCGGCGGCGCTCGGAAAGCTTCAGAAACTAGACACGCTCTTTCTTCAGGTGAATGCGCTCTCCGGCTCGCTTACTCCTGAGCTGGGGAACCTGAAGAGCCTCAAGTCAATGGACCTGTCCAACAACATGCTCTCCCGCGAGGTTCCGGCCAGTTTCGCAGAGCTGAAGAATCTTACTCTGTTGAACCTGTTCCGGAACAAGCTCCACGGCGCCATTCCCGAGTTTGTTGGAGCGTTACCGGCCTTGGAGGTGTTGCAGCTTTGGGAGAACAACTTCACGGGGAGCATTCCTCAGAGTTTGGGAAGAAATGGAAGACTCACACTTGTTGATCTGTCTTCCAACAAGATAACGGGTACTCTTCCTCCTGACATGTGTTACGGGAACCGTCTGCAGACTCTCATAACTCTCGGGAACTATCTGTTCGGTCCCATTCCTGATTCACTTGGGAAGTGCGAGTCTCTGAACAGGATTCGGATGGGAGACAACTTTCTGAACGGTTCTATTCCGAAGGGTTTATTTAGTCTTCCAAAGCTGACCCAGGTTGAGCTTCAAGATAATCTTCTCACGGGGCAGTTTCCTGAGGGTGGTTCCATTGCCACTAATCTTGGTCAGATTAGTCTCTCTAATAACAAACTCTCTGGGTCATTGCCACCCACCATTGGGAACTTCACTAGCATGCAGAAGCTTCTTCTGGATGGCAACAAGTTCTCGGGTCGAATCCCTCCTCAAATTGGAAGGCTGCAACAGCTTTCAAAAATTGATTTTAGCCATAACAAGTTTTCGGGTCCCATTGCTCCCGAGATAAGTCGGTGCAAGCTTTTAACCTTCATTGATCTCAGCGGTAACGACCTCTCTGGTGAGATTCCAAACGAGATTACTTCCATGCGGATACTGAATTACCTGAACCTTTCAAGAAACCATCTAGATGGGTCTATTCCAGGGTCCATTGCCTCTATGCAGAGTTTAACTTCTGTTGATTTTTCATACAACAATTTCTCTGGTTTGGTTCCTGGCACCGGGCAATTTGGCTACTTTAACTACACCTCTTTCTTAGGAAACCCTGAACTCTGTGGCCCTTATTTGGGTCCTTGTAAAGACGGGGTTGCCAATGGCCCTCGCCAACCCCATGTTAAAGGTCCTCTATCTTCTTCTCTGAAGCTTTTATTAGTTATTGGGTTGCTTGTGTGCTCCATTTTATTTGCTGTTGCGGCAATAATCAAAGCTCGGGCTTTAAAAAAGGCCAGTGAAGCTAGAGCATGGAAATTAACAGCATTCCAGCGTTTGGACTTCACTGTTGATGATGTTTTGGATTGCTTGAAGGAGGACAACATAATAGGGAAAGGAGGTGCTGGCATTGTGTACAAAGGGGCAATGCCGAACGGGGACAATGTTGCTGTGAAAAGGTTACCAGCTATGAGCAGAGGATCTTCCCATGATCATGGTTTCAATGCGGAGATTCAAACATTGGGGAGGATTCGACACAGACACATTGTTAGACTGTTGGGTTTCTGTTCAAACCATGAGACAAACCTCTTGGTGTATGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGCAAGAAGGGGGGCCATTTGCATTGGGACACAAGGTATAAAATTGCGGTGGAGGCTGCAAAGGGCCTTTGCTATCTACACCATGACTGTTCACCACTCATTGTCCATAGAGATGTTAAATCCAACAACATCCTTCTTGATTCCAATTTTGAAGCACATGTTGCTGATTTTGGACTCGCTAAGTTCCTGCAAGATTCTGGAACATCTGAATGCATGTCTGCTATTGCTGGTTCTTATGGATACATAGCTCCAGAGTATGCCTACACACTGAAAGTTGATGAGAAGAGCGATGTGTACAGCTTTGGGGTGGTCCTTTTGGAGCTTGTAACAGGCAGGAAACCAGTTGGGGAGTTTGGTGATGGTGTGGACATTGTGCAATGGGTTAGAAAAATGACGGATTCAAACAAGGAAGGAGTTCTAAAGGTTCTTGATCCTAGACTTCCCTCGGTTCCACTTCATGAGGTGATGCATGTTTTCTACGTAGCCATGCTATGCGTTGAGGAGCAGGCAGTGGAACGACCAACTATGCGTGAAGTTGTTCAAATTCTGACAGAGCTTCCAAAGCCACCAAACTCAAAACAGGGAGACATAACAGTCACGGAGACCTCTTTGTCATCATCAAACAGTTTAGAGTCTCCAACTACAGCATCTAAGGAACCTAAAGATAATCAACATCCTCCTCAGTCGCCCCCACCTGATCTTCTTAGCATTTGA 3051 0.4985 MRLLFLFLFLFLHFHFHLLHAAHVSEYRALLSFKSSSVTDDPTHALSSWNSSTPLCSWFGVTCDSRRHVTSLNLTSLSLSGTLSDDLSHLPFLSNLSLADNKFSGPIPASLSVLSGLRFLNLSNNVFNATFPSPLARLANLQVLDLYNNNMTGPLPLSVTAMPLLRHLHLGGNFFSGQIPPEYGTWQHLQYLALSGNELAGNIPPELGNLTALRELYIGYFNTYSGGIPPEIGNLSELVRLDAAYCGLSGEIPAALGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNMLSREVPASFAELKNLTLLNLFRNKLHGAIPEFVGALPALEVLQLWENNFTGSIPQSLGRNGRLTLVDLSSNKITGTLPPDMCYGNRLQTLITLGNYLFGPIPDSLGKCESLNRIRMGDNFLNGSIPKGLFSLPKLTQVELQDNLLTGQFPEGGSIATNLGQISLSNNKLSGSLPPTIGNFTSMQKLLLDGNKFSGRIPPQIGRLQQLSKIDFSHNKFSGPIAPEISRCKLLTFIDLSGNDLSGEIPNEITSMRILNYLNLSRNHLDGSIPGSIASMQSLTSVDFSYNNFSGLVPGTGQFGYFNYTSFLGNPELCGPYLGPCKDGVANGPRQPHVKGPLSSSLKLLLVIGLLVCSILFAVAAIIKARALKKASEARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPNGDNVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQILTELPKPPNSKQGDITVTETSLSSSNSLESPTTASKEPKDNQHPPQSPPPDLLSI 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01814 1016 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 20 83 - -
Pumo4g01814 1016 MobiDBLite consensus disorder prediction 966 1002 - -
Pumo4g01814 1016 Pfam Protein tyrosine and serine/threonine kinase 693 962 IPR001245 GO:0004672|GO:0006468
Pumo4g01814 1016 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 660 768 - -
Pumo4g01814 1016 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 769 979 - -
Pumo4g01814 1016 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 84 327 - -
Pumo4g01814 1016 Gene3D Ribonuclease Inhibitor 187 328 IPR032675 -
Pumo4g01814 1016 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Pumo4g01814 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 813 825 IPR008271 GO:0004672|GO:0006468
Pumo4g01814 1016 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 335 620 - -
Pumo4g01814 1016 SMART LRR_typ_2 283 306 IPR003591 -
Pumo4g01814 1016 SMART LRR_typ_2 331 355 IPR003591 -
Pumo4g01814 1016 SMART LRR_typ_2 475 499 IPR003591 -
Pumo4g01814 1016 SMART LRR_typ_2 571 594 IPR003591 -
Pumo4g01814 1016 SMART LRR_typ_2 138 162 IPR003591 -
Pumo4g01814 1016 SUPERFAMILY Protein kinase-like (PK-like) 685 962 IPR011009 -
Pumo4g01814 1016 SUPERFAMILY RNI-like 71 393 - -
Pumo4g01814 1016 Gene3D Transferase(Phosphotransferase) domain 1 769 984 - -
Pumo4g01814 1016 SUPERFAMILY L domain-like 355 616 - -
Pumo4g01814 1016 MobiDBLite consensus disorder prediction 966 1016 - -
Pumo4g01814 1016 SMART serkin_6 691 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01814 1016 ProSiteProfiles Protein kinase domain profile. 691 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01814 1016 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 221 963 - -
Pumo4g01814 1016 Gene3D Phosphorylase Kinase; domain 1 657 768 - -
Pumo4g01814 1016 Gene3D Ribonuclease Inhibitor 329 621 IPR032675 -
Pumo4g01814 1016 Gene3D Ribonuclease Inhibitor 23 183 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01814 Pumo-Chr4 24479145 24483542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01814 24 992 Receptor kinase-like Gene Family AT5G65700 80.718 0.0 1584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pumo4g01814 PK_Tyr_Ser-Thr 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01814 - - gmx:100499646 1842.4