Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01793 ATGTCTGTGGTTCCTTGCTACCACACCACTGAAAAACATAACTTTAGGGGTGAAAGCTTTCAAGAGTTTTTTGAGTGTTGGATGGCTGAGCAAAACCAACACCTGAAGGAACTTTTAGCTGCTGAATCAACTCATCTTACAGATGAGCAAGTGCAGGCACTGAATGATAGGGTGGTTGAGCATTATGAGCGCTACTATAAAGCCAAGTCAAGGTGTGCAAAGCAAGATGTGTTGGCCATGTTTTCCCCAACATGGCTGAGATCCTTGGAAAAGGCTTTTCTTTGGATTGGTGGATGGAGACCCAGCATGGCATTTCACTTGCTATATTCCAAGTCTGGTTTGCAATTTGAGGCCAGACTCAATGAACTGATTCAGTGTCTAAGAACACATGATTTGGGAGACCTATCAGCATCCCAACTTGCTCAGCTTGATGAGATGCAAAGGAGGACCATTTTAGAGGAGAGGGAAATCACAGATTTGATGGAAAGTCACCAAGAGACAATGGCTGATGCTCCAATGGTGGAGTTGTCTCATGTGGTTTCTGAGATTATTAGAGTCAATGAAACAAGAGAGATTGGTAAGAATAAGGAAATACAGGACATGGTTGAATCAACTCTGGTGCCAATGGTGGAAGGTTTGGAGAAGATCCTGCTGAAAGCTGATGAGCTAAGGTTGAGAACACTGAAGGCCATTGTTAATGTTCTGACTCCAAAACAAGCCATTCACTTCTTAATTGCTGCTGCAGAGTTGCACCTGAGGCTACATGAGTGGGGCAAGAAGATGGAATGCCAAAAAGGGCAATCATGGTTTTGGTGA 816 0.4375 MSVVPCYHTTEKHNFRGESFQEFFECWMAEQNQHLKELLAAESTHLTDEQVQALNDRVVEHYERYYKAKSRCAKQDVLAMFSPTWLRSLEKAFLWIGGWRPSMAFHLLYSKSGLQFEARLNELIQCLRTHDLGDLSASQLAQLDEMQRRTILEEREITDLMESHQETMADAPMVELSHVVSEIIRVNETREIGKNKEIQDMVESTLVPMVEGLEKILLKADELRLRTLKAIVNVLTPKQAIHFLIAAAELHLRLHEWGKKMECQKGQSWFW 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01793 271 Pfam Seed dormancy control 34 110 IPR025422 GO:0006351|GO:0043565
Pumo4g01793 271 ProSiteProfiles DOG1 domain profile. 17 264 IPR025422 GO:0006351|GO:0043565
Pumo4g01793 271 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 18 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01793 Pumo-Chr4 24069484 24070299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01793 11 254 bZIP Transcription Factor Family AT5G06960 26.295 1.06e-19 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01793 - - gmx:100784399 416.772