Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01757 ATGAAGTGTTTCTTCTTCAAAGAAAAGTCCAAATCCGCCCCTGAATTGCACAAGAAGAAGAACCCCGCCGTGAACCGCGCCGCCAACTCCACCGGCTCCGTGTCTTCACCCAGGAGTGTGAAAGACTTGTACAGAGAGAAAGAGCACAGCTTCAGAGTTTTCACCTTGCAAGAGCTGAGAGATGCCACCAACGGCTTCAATAGGATGCTCAAGCTTGGAGAAGGGGGTTTCGGGAGTGTGTATAAAGGGTCCATTAGACCCCCTGATGGACAAGGTGATCCAATTCCAGTTGCAATTAAAAGGCTCAACACGCGTGGCTTCCAGGGTCATAAAGAATGGCTTGCAGAAGTTCAATTTCTCGGCATTGTTAATCACCCAAATTTGGTTAAGCTTTTGGGATACTGCTCCGTGGATGGGGAAAGAGGAATCCAACGGCTCTTGGTGTATGAATTCATGCCCAACAGGAGCTTGGAGGATCACCTCTTCAACAAAAATTTACCAACCCTGCCTTGGAAAACGAGATTGGAGATCATGCTTGGTGCTGCTCAAGGATTAGCTTATCTACATGAAGGACTGGAAATTCAGGTAGTTGGAACACAGGGATATGCCGCACCAGAGTACATTGAGACGGGTCACCTGAAAGTTCAGAGTGACATGTGGAGTTTTGGTGTTGTACTGTATGAGATCCTCACAGGAAGGAGGTCATTGGAAAGAAACCGTCCCACAGCAGAACAAAAGCTTCTAGATTGGGTCAAACAGTACCCTGCTGACACCAGCAGATTCGTCATCATAATGGACCCGCGTCTCAGAAACCAGTATTCTCTTCCAGCAGCTCGCAAAATAGCCAAGTTGGCTGATAGCTGCTTGAAGAAGAATGCAGAGGATAGACCCTCCATGAGTCAGATAGTGGAAGGCTTGAAGCAAGCATTGCAATATTCAGACACTTCTCAAGACATTGCTGAATCCTCCTCATCTCGGTCTAAATTGGTCAGAAAAAAGTAA 1002 0.4701 MKCFFFKEKSKSAPELHKKKNPAVNRAANSTGSVSSPRSVKDLYREKEHSFRVFTLQELRDATNGFNRMLKLGEGGFGSVYKGSIRPPDGQGDPIPVAIKRLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDGERGIQRLLVYEFMPNRSLEDHLFNKNLPTLPWKTRLEIMLGAAQGLAYLHEGLEIQVVGTQGYAAPEYIETGHLKVQSDMWSFGVVLYEILTGRRSLERNRPTAEQKLLDWVKQYPADTSRFVIIMDPRLRNQYSLPAARKIAKLADSCLKKNAEDRPSMSQIVEGLKQALQYSDTSQDIAESSSSRSKLVRKK 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01757 333 SUPERFAMILY Protein kinase-like (PK-like) 48 305 IPR011009 -
Pumo4g01757 333 Pfam Protein kinase domain 195 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01757 333 ProSitePatterns Protein kinases ATP-binding region signature. 72 100 IPR017441 GO:0005524
Pumo4g01757 333 Gene3D Transferase(Phosphotransferase) domain 1 195 330 - -
Pumo4g01757 333 Gene3D Transferase(Phosphotransferase) domain 1 152 194 - -
Pumo4g01757 333 MobiDBLite consensus disorder prediction 24 38 - -
Pumo4g01757 333 PANTHER OS01G0588500 PROTEIN-RELATED 31 192 - -
Pumo4g01757 333 MobiDBLite consensus disorder prediction 15 39 - -
Pumo4g01757 333 ProSiteProfiles Protein kinase domain profile. 66 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01757 333 Pfam Protein tyrosine and serine/threonine kinase 70 190 IPR001245 GO:0004672|GO:0006468
Pumo4g01757 333 Gene3D Phosphorylase Kinase; domain 1 46 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01757 Pumo-Chr4 23115993 23118192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01757 3 306 Glycoside Hydrolase AT3G07070 35.574 7.47e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pumo4g01757 PK_Tyr_Ser-Thr 4.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01757 - - gmx:100305403 604.749