Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01746 ATGGAGGAACGGTATGAGACATTGAAGGAACTTGGTTCTGGGAATTTTGGTGTGGCCAGGTTGGCCAAAGACAAGAAAACTGGAGAGCTTGTTGCGGTCAAATACATAGAGAGGGGCAAAAAGATTGATGAGAATGTTCAGAGGGAGATAATTAACCACCGATCTTTAAGGCATCCAAATATAATCAGGTTCAAAGAGGTCTTACTGACCCCTACACATTTAGCTATTGTCTTGGAGTATGCTTCAGGTGGTGAACTTTTTGAGAGGATATGTAATGCTGGTCGATTTAGCGAAGATGAGGCAAGATATTTCTTCCAGCAGCTAATATCTGGGGTTAGCTACTGTCATTCAATGGAAATTTGTCATAGAGATCTAAAATTGGAAAACACTCTCTTGGAAGGAAATCCATCTCCCCGGCTTAAAATTTGTGACTTTGGTTACTCCAAGTCTGCTCTACTGCACTCTCAACCTAAATCAACAGTTGGAACTCCTGCATACATTGCTCCAGAGGTTCTGTCGCGAAAGGAGTATGATGGAAAGATTTCAGATGTTTGGTCCTGTGGTGTGACTCTTTATGTCATGTTAGTTGGTGCATACCCATTTGAAGATCCAGAAGATCCTAGAAATTTCAGAAAGACTATTGGGAGAATAATAGGTGTTCAGTACTCCATACCCGACTATGTTAGAGTTTCTACCGAGTGTAGGAATCTTCTATCTCGCATCTTTGTTGCTGATCCTGCCAAGGTATGTACCTTCAATTCTACAAAAGCATACAGGCACTATAATCACAAAATAGACAAAACTTAG 807 0.4089 MEERYETLKELGSGNFGVARLAKDKKTGELVAVKYIERGKKIDENVQREIINHRSLRHPNIIRFKEVLLTPTHLAIVLEYASGGELFERICNAGRFSEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLEGNPSPRLKICDFGYSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKISDVWSCGVTLYVMLVGAYPFEDPEDPRNFRKTIGRIIGVQYSIPDYVRVSTECRNLLSRIFVADPAKVCTFNSTKAYRHYNHKIDKT 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01746 268 PANTHER SERINE/THREONINE KINASE 3 255 - -
Pumo4g01746 268 FunFam Serine/threonine-protein kinase SRK2E 81 268 - -
Pumo4g01746 268 Gene3D Transferase(Phosphotransferase) domain 1 81 264 - -
Pumo4g01746 268 SUPERFAMILY Protein kinase-like (PK-like) 3 256 IPR011009 -
Pumo4g01746 268 Pfam Protein kinase domain 5 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01746 268 FunFam Serine/threonine-protein kinase SRK2E 1 80 - -
Pumo4g01746 268 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01746 268 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01746 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Pumo4g01746 268 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pumo4g01746 268 PIRSF ILK 1 255 - -
Pumo4g01746 268 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01746 Pumo-Chr4 22970067 22974025 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01746 4 248 CBL-interacting serine-threonine protein kinases AT5G25110 43.359 3.78e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pumo4g01746 Pkinase 2.1e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02133 8 58351710 58352608 Pumo4g01746 4 22970067 22974025 PCT