Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01717 ATGTTTGTTCTAGAGAAAGATGATGAGATCATTGCTGCAGCTTCTATAAGATTTCATGGGGGAGGGATTGCAGAAATGCCATTTATTGCTACAGAAATGGAACACTGGGGCCAAGGAGTTTGCCAGGAATTAATGAGGGTAATTGAATCGTTCCTACGCGACCTTAAAGTCACAAAGTTGATAATTCCATCTGTTCCGGCGACTTCTGATATGTGGAAGAGCAAGTTCAACTTTACTGAGGTGAGCAAAAAGCTGATGAGAGAAATATCCTCCTATAAAATTTTGATGTTCCCTGGTACTTTAAGACTGTACAAGGACTTGTCAGCAAGCATAGCAGACGGTGGTGATGACATTGAAGACGATAAAACTGACATAAAGAATGACCTGGAACCACAAATGGAGCAGGCAGAGGCTACTGCTAGAATTGAACATGGACCCTCATCAGGAAGATTAGCAGAAGTAAAAGAGTAG 471 0.4161 MFVLEKDDEIIAAASIRFHGGGIAEMPFIATEMEHWGQGVCQELMRVIESFLRDLKVTKLIIPSVPATSDMWKSKFNFTEVSKKLMREISSYKILMFPGTLRLYKDLSASIADGGDDIEDDKTDIKNDLEPQMEQAEATARIEHGPSSGRLAEVKE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01717 156 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 79 IPR016181 -
Pumo4g01717 156 Gene3D - 1 96 - -
Pumo4g01717 156 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 108 IPR000182 GO:0016747
Pumo4g01717 156 PANTHER PHD FINGER PROTEIN 12 2 122 IPR042163 GO:0003714|GO:0045892
Pumo4g01717 156 MobiDBLite consensus disorder prediction 131 156 - -
Pumo4g01717 156 CDD NAT_SF 1 62 - -
Pumo4g01717 156 Pfam Acetyltransferase (GNAT) family 2 62 IPR000182 GO:0016747
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01717 3 109 PHD Transcription Factor Family AT4G14920 49.533 3.06e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01717 - - pvu:PHAVU_009G190800g 201.445