Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pumo4g01712 | ATGTTCGGAGAGAGTAGTAGTACTACCTACGAGTCAGATTTGGCACTCTTGGATTCAATTCGCCGCCACTTGCTGGGCGAGTCCGAATCCATATTCGGAGCCCCGAATTCGCTTTCGGATCGGAGCTCCAGCTTCAGCAGCTTGGATTCGTGTTTGAGCGACAACTGGGGCGAGCTTCCCTTTAAGGAAGACGATTCCGAAGACATGGTGCTCTACGGCGTGCTCCGCGACGCCGTTAATGTCGGGTGGGTCCCATCTCTCGATGCCTGGTCGCCCGAAAGCGTCTCGTCGGGTTTTCCGGCGGAGATCGCGGTGAAGCAGGAGCCGGATGTCATGCCGGCGGTGATTAGTCCGCCTCCGGCGGTGATGCAAGAGAAGAAGGTTGCTCCGGCGAAGGGGAAGCACTACCGGGGCGTGAGGCAGCGGCCGTGGGGGAAGTTCGCGGCGGAGATCCGGGACCCGGCGAAAAACGGGGCGCGGGTTTGGCTCGGAACGTTTGAGACGGCGGAGGACGCGGCGTTGGCGTACGACCGCGCCGCCTACCGGATGAGGGGGTCGAGGGCGTTGCTGAATTTTCCGTTGAGGGTTAACTCCGGCGAACCCGACCCGGTGAGAGTGACGTCGAAGCGGTCGTCGTCGCCGGAGAGTGGGGCGGCGCCGGCGAAAAAGAAGAAAGTGGTGATGGGGACGGGGCAGGGGCAAGTGGGAAGTCAAGTGGCAGAGTGTACACGTGGCGAACAGTTATTGGTTGGCTGA | 756 | 0.6138 | MFGESSSTTYESDLALLDSIRRHLLGESESIFGAPNSLSDRSSSFSSLDSCLSDNWGELPFKEDDSEDMVLYGVLRDAVNVGWVPSLDAWSPESVSSGFPAEIAVKQEPDVMPAVISPPPAVMQEKKVAPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSSPESGAAPAKKKKVVMGTGQGQVGSQVAECTRGEQLLVG | 251 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pumo4g01712 | 251 | PRINTS | Ethylene responsive element binding protein signature | 159 | 175 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo4g01712 | 251 | PRINTS | Ethylene responsive element binding protein signature | 136 | 147 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo4g01712 | 251 | CDD | AP2 | 134 | 193 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo4g01712 | 251 | Gene3D | AP2/ERF domain | 134 | 196 | IPR036955 | GO:0003700|GO:0006355 | |
Pumo4g01712 | 251 | ProSiteProfiles | AP2/ERF domain profile. | 135 | 193 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo4g01712 | 251 | PANTHER | DNA-BINDING DOMAIN | 109 | 217 | IPR044808 | GO:0003700|GO:0009873 | |
Pumo4g01712 | 251 | MobiDBLite | consensus disorder prediction | 200 | 238 | - | - | |
Pumo4g01712 | 251 | Pfam | AP2 domain | 135 | 185 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo4g01712 | 251 | SUPERFAMILY | DNA-binding domain | 135 | 195 | IPR016177 | GO:0003677 | |
Pumo4g01712 | 251 | SMART | rav1_2 | 135 | 199 | IPR001471 | GO:0003700|GO:0006355 | |
Pumo4g01712 | 251 | FunFam | Ethylene-responsive transcription factor 2 | 134 | 194 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pumo4g01712 | Pumo-Chr4 | 22508558 | 22510145 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pumo4g01712 | 11 | 250 | AP2-EREBP Transcription Factor Family | AT4G17500 | 55.805 | 4.16e-83 | 248 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Pumo4g01712 | AP2 | 9.8e-15 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pumo4g01712 | K09286 | - | gmx:100803653 | 404.06 |