Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01694 ATGCGTCAATGGGGCAAATGGGTATCCGAAATAAGAGAGCCAAGGAAGAAATCAAGAATTTGGCTTGGAACTTTTCCCACGCCGGATATGGCAGCTCGAGCCCATGACGTGGCGGCTCTCACAATCAAAGGCAGCTCGGCTTACCTCAATTTCCCCGAATTAGCCGCCGAGCTGCCCCGCCCCGCCAGCACCTCCCCTAAGGACATCCAAGCTGCGGCGGCTAAAGCCGCCGCCTTGGATTTCAGCCACCGAAGCCATGAAGCCGAATTGGAAGCTGAGTCCGAGCTGAGCCGAGCCGTTTCCTCCTCAAGCCTCACACAAGCATCATCATCATCCAATTCATCGTTGAAGGGTGAGGATGACACATTCTTGGACCTTCCTGATCTTTCTCTAGACTTGAACCATGGTGCTGATGAGTTTCACTATTCCTCGGCTTGGCTTGTAGCCGGAGCCGAACATATAGAGCTGGGTTTCCGGCTTGAGGAACCTTTTCTATGGGAATCATATTAA 510 0.5275 MRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAELPRPASTSPKDIQAAAAKAAALDFSHRSHEAELEAESELSRAVSSSSLTQASSSSNSSLKGEDDTFLDLPDLSLDLNHGADEFHYSSAWLVAGAEHIELGFRLEEPFLWESY 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01694 169 FunFam Ethylene-responsive transcription factor 2 1 53 - -
Pumo4g01694 169 MobiDBLite consensus disorder prediction 96 119 - -
Pumo4g01694 169 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 1 131 - -
Pumo4g01694 169 Gene3D AP2/ERF domain 1 53 IPR036955 GO:0003700|GO:0006355
Pumo4g01694 169 Pfam AP2 domain 3 44 IPR001471 GO:0003700|GO:0006355
Pumo4g01694 169 SUPERFAMILY DNA-binding domain 2 53 IPR016177 GO:0003677
Pumo4g01694 169 CDD AP2 1 54 IPR001471 GO:0003700|GO:0006355
Pumo4g01694 169 SMART rav1_2 1 58 IPR001471 GO:0003700|GO:0006355
Pumo4g01694 169 MobiDBLite consensus disorder prediction 85 119 - -
Pumo4g01694 169 ProSiteProfiles AP2/ERF domain profile. 1 52 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01694 Pumo-Chr4 21525641 21527385 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01694 1 165 AP2-EREBP Transcription Factor Family AT2G44940 52.083 2.42e-53 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pumo4g01694 AP2 2.2e-09 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01694 - - gmx:100812293 266.929