Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01678 ATGACAATGGTGGGGATGATGAATGGAGGAATGGTGGAAGATATAGCAATAATTGGAGGGTTGATAGGGGTGCAATTTGTTTACGCAGGGAATGCTGTGTTGCTTAGTTATCTTATGTCTTTGGGCCTCGAATCTCTTACCGTTGTCATTTTTACTTCTTTTGCAACGTTCCTTGTTCTCCTACCCCTTGCCTTTTATTATGAAAGGTGTAAATGGCCAAGGAAAGTTAGTTTCAAGTTGCTTATACAGCTTCTCTTGCTTTCATTAGGAGGGGTAACATTGTTCCAGTCTCTATTCCTTAAAGGAATCAATCTAACCTCGCCAGCAATGGGAACAGCCATGCCAAACCTTGCACCAGGTCTAATCTTCATCATCGCATGGATTTTTCGGTTGGAAAAAGTCAACTTGAGCTGCACATATAGTAGAGTAAAAATCATTGGCACATTGCTTTGTGTCTTGGGGGCTCTCACAATGAGCATAATGCAAAGCGTCTCTAAAGTACCTACTTCCGCTAAAGAAGGAACAATTCAATTATCATCTCCACCGCCAAATGTAACGTTTGACAGACACAAGATAATCGGTTGTCTCTATCTCATGGCCGCAATCCTCATTTTGTCAAGCAACATTGTCCTACAGGCCTTTACTCTAGGAGATTTTCCTGCACCGATATCATTGTGTGCAATAACTTCCTTTTTTGGGACGTTCATGACTGCCGCAGTTCAATTAGTTGAAGATCACGAATTCAAAACTGGTTGGCCACTTGTGAGTGTTGGAGACATGATTGGCTATTCTCTTCTGGCAGGTGCAGTGAGTGGAATATGCTTGAGCGTGAATGGTTGGGCACTTGAGAAGAGAGGGCCAGTGTTGGTCTCCATGTTCAGCCCTATTGGCACAGTCTGCTCTGTCATTTTCTCAGTTGTTACTCTAGGACAGACCATTAATATTGGAAGCCTTGCGGGTATGTTCCTCATGTTCACTGGGCTCTACTTTGTGCTTTGGGCCAAAGGGAAAGAAAGCTATGCAAAAGAGAGTGAATATGATGCAGAGAAGCCTCTCTTAAGTTGA 1065 0.431 MTMVGMMNGGMVEDIAIIGGLIGVQFVYAGNAVLLSYLMSLGLESLTVVIFTSFATFLVLLPLAFYYERCKWPRKVSFKLLIQLLLLSLGGVTLFQSLFLKGINLTSPAMGTAMPNLAPGLIFIIAWIFRLEKVNLSCTYSRVKIIGTLLCVLGALTMSIMQSVSKVPTSAKEGTIQLSSPPPNVTFDRHKIIGCLYLMAAILILSSNIVLQAFTLGDFPAPISLCAITSFFGTFMTAAVQLVEDHEFKTGWPLVSVGDMIGYSLLAGAVSGICLSVNGWALEKRGPVLVSMFSPIGTVCSVIFSVVTLGQTINIGSLAGMFLMFTGLYFVLWAKGKESYAKESEYDAEKPLLS 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01678 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 337 - -
Pumo4g01678 354 PANTHER WAT1-RELATED PROTEIN 21 342 IPR030184 GO:0016020|GO:0022857
Pumo4g01678 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 160 - -
Pumo4g01678 354 Pfam EamA-like transporter family 193 332 IPR000620 GO:0016020
Pumo4g01678 354 Pfam EamA-like transporter family 21 159 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01678 Pumo-Chr4 21327556 21330556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01678 7 349 Nodulin-like Gene Family AT5G47470 56.977 1.65e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01678 - - gmx:100809182 620.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo8g02196 8 59017896 59020631 Pumo4g01678 4 21327556 21330556 PCT