Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01632 ATGATCAGAAAGTCACCCAAGTACCTTGCGAACCCCATGTGTGTAATCTTGAAATTGGTGCGGTGTTTTGGACAGGGAAGCGATGGATTGGGTTTCCCAAAGTGGGAACCCAATTATGTACAATTGGGCCACAGCCCAATAGAGCTATTACCAAAGGGCCATTTGGCGGTGTATGTGGGCGAATCGGAAGATGAGAAGCAACGTGTATTGGTACCAGTTACTCACTTCAATCACCCCCTGCTTGGGAAGCTATTGGAGGATGCAGAGAAAGTTTATGGGTTTAATCATCCGGGTGTAATAACCATACCATGCAGAGTCTCCGAGTTCCAGAGAGTTCAGAAGATTATTGCCACCACTGGAGCTGGAGGCTACCACAGGCGCCTTAGAATTTGTTGCTCCATCAAGTAA 408 0.473 MIRKSPKYLANPMCVILKLVRCFGQGSDGLGFPKWEPNYVQLGHSPIELLPKGHLAVYVGESEDEKQRVLVPVTHFNHPLLGKLLEDAEKVYGFNHPGVITIPCRVSEFQRVQKIIATTGAGGYHRRLRICCSIK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01632 135 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 43 111 IPR003676 GO:0009733
Pumo4g01632 135 Pfam Auxin responsive protein 50 114 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01632 Pumo-Chr4 20578605 20579012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01632 50 116 Calmodulin-binding Proteins AT3G43120 47.761 2.42e-14 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01632 K14488 - gmx:102668727 213.001