Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01628 ATGGCAGCAAAACTACTAAGCCTTTCTCTGCTACTCCTCAATCTCATCCTTCTTCACACGTCCGGCACCGCACTTGCCAAAACAACAACAACAACAACAACAGACTTCATCAAGTCCTCATGCAAGAACACGCGCTACCCCGTCGCGTGCGTTCAAAGCCTCTGGGCCTACGCCAGCGTGATTCGCCAGAGCGAGCAGCAGCTAGCCATCACGGCCCTGTCCGTGAGCGTGTCCAAGACCAAATCATGCGCGTCGTTCGTGAAAATAATGGGCTCCGTGAAGGGAATGAAGCCCAGAGAGTACAATGCTCTGCGAGACTGCGTAGAGAACATGAATGACAGCGTGGACCGTCTTAGCCAATCGGTTGAGGAGCTTGGGCTTGTGGGTAAGGCCAAGGGGAAGGACTTCTTGTGGCACATGAGTAATGTCCAGACTTGGGTTAGTGCTGCCATCACCGATCAGGACACGTGCCTTGACGGGTTTGATGGGCCCCACGTGGACGCGAACTTGAAGGCTTTGGTTAGGCCCAGGGTCGTGGATGCTTCCCAAGTCACTAGTAATGCTCTTGCGTTGGTTAATCGCTTTGCCTCCAAGTATCGCACTGCTTCACAAACTTAA 618 0.5324 MAAKLLSLSLLLLNLILLHTSGTALAKTTTTTTTDFIKSSCKNTRYPVACVQSLWAYASVIRQSEQQLAITALSVSVSKTKSCASFVKIMGSVKGMKPREYNALRDCVENMNDSVDRLSQSVEELGLVGKAKGKDFLWHMSNVQTWVSAAITDQDTCLDGFDGPHVDANLKALVRPRVVDASQVTSNALALVNRFASKYRTASQT 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01628 205 Pfam Plant invertase/pectin methylesterase inhibitor 35 191 IPR006501 GO:0004857
Pumo4g01628 205 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 195 IPR035513 -
Pumo4g01628 205 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 196 IPR035513 -
Pumo4g01628 205 FunFam Pectin methylesterase inhibitor 1 32 195 - -
Pumo4g01628 205 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 191 - -
Pumo4g01628 205 CDD PMEI-like_3 39 197 - -
Pumo4g01628 205 SMART PMEI_2 32 191 IPR006501 GO:0004857
Pumo4g01628 205 NCBIfam pectinesterase inhibitor domain 7 193 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01628 Pumo-Chr4 20540857 20541748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01628 27 192 Carbohydrate Esterase AT3G14310 29.341 1.14e-21 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01628 - - gmx:100789460 306.99