Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01602 ATGAGGGACTTGAAAACTTTACGGGAATTGGTTGCAAGTGTTACAAATTGGGAGACACGTGAGAAGATATCTGGCAAACCTTTCAGGCCTAAATTTTTGGATGTGGCAATATCACTACATGCGCCAGAATTATATAGCAAAGAAGAGTTGGCTCAAATCAGTTATTGCAGAAAACTACTTTCAGGGGTTGATGAATCGAGGTCATTGACAAAGAATGTTAAGAGGGAGTCCAAAAAAAGACAAACTGAAGAAATGCTTGAAGAGGAAAGAGTCATGGCAATGAAAAAAAAACCAAGAAAGATAATCTTGACAAACAACAGGTCATCACCAGATTTGCCTGCAGAATTCAAGAATCGAGTCACTGAGTTGAATGGTTATGATCTTAAATTTCTCATGCACAAGAGACTTTTTTCCTCAGATGTGAACCCGAATAGCAATCGTTTGTCAATGCCGATAAACGAAGTTAAGCGTAATTTCCTCACAGAAGCTGAGATTGCAAAATTGGATGAAAGAGAAGGCGCTCGACTTGTTGGTGTGGAAGTGACTGTGTTGGACCCATGTCTTAGAGAATTTACTTTATCATTGAAGAAGTGGAGCATGCAAAGGACCGAAACCTACAACCTCGTGAAGAATTGGAATGATATTGTCTCCGATAATAAGTTTGAAGCTGATCAAGAACTCCAAATATGGTCCTTTAGGGTTCACGACGATAAGCTTTATTTTCTATTAAACAAACTTTGA 741 0.386 MRDLKTLRELVASVTNWETREKISGKPFRPKFLDVAISLHAPELYSKEELAQISYCRKLLSGVDESRSLTKNVKRESKKRQTEEMLEEERVMAMKKKPRKIILTNNRSSPDLPAEFKNRVTELNGYDLKFLMHKRLFSSDVNPNSNRLSMPINEVKRNFLTEAEIAKLDEREGARLVGVEVTVLDPCLREFTLSLKKWSMQRTETYNLVKNWNDIVSDNKFEADQELQIWSFRVHDDKLYFLLNKL 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01602 246 Pfam B3 domain-containing protein At2g31720-like 120 217 IPR005508 GO:0003677
Pumo4g01602 246 SUPERFAMILY DNA-binding pseudobarrel domain 132 235 IPR015300 -
Pumo4g01602 246 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 69 246 IPR005508 GO:0003677
Pumo4g01602 246 Gene3D - 121 245 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01602 Pumo-Chr4 20233732 20239870 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01602 99 245 B3 DNA Binding Superfamily AT1G05930 25.333 6.17e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01602 - - gmx:102666575 327.02