Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01598 ATGGGATACCTAGCTCCTGAATATATTACTACTGGACGCTTTACTGAGAAGAGTGACATATATGCATTTGGGGTTATTGTCCTTCAAGTTCTATCTGGAAAGGCATTGATAGGGGGTTCAATCAGGGTGGCAGTTGAATCTTTCAGATTCGAAGATTTTGTTGACACAAATCTGAAGGGAGATTATTCTAAATCTGAAGCCGCAATTCTTTCAAAGCTTGCAATTCAGTGCACCCATGAAGTGCCAGAGCAAAGGCCAACCATGGTGGAGGTGATTCAAGAGCTGACCATGCTTCCTTCCCATTCTTCATAA 312 0.4231 MGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKALIGGSIRVAVESFRFEDFVDTNLKGDYSKSEAAILSKLAIQCTHEVPEQRPTMVEVIQELTMLPSHSS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01598 103 SUPERFAMILY Protein kinase-like (PK-like) 2 98 IPR011009 -
Pumo4g01598 103 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo4g01598 103 Gene3D Transferase(Phosphotransferase) domain 1 1 103 - -
Pumo4g01598 103 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 96 - -
Pumo4g01598 103 Pfam Protein tyrosine and serine/threonine kinase 3 95 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01598 Pumo-Chr4 20209285 20210228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01598 2 95 Receptor kinase-like Gene Family AT2G35620 41.905 4.95e-19 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pumo4g01598 PK_Tyr_Ser-Thr 1.4e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01598 - - gmx:100779591 187.963