Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01591 ATGATATTGAAGAATTTTATGACTAATATTGTGGAAATCTTGGATGAGCACAAACAGGACATGGTTACCGGGGGAACTGACACATCCTCCAACACAATTGAGTTTGCAATGGCAGAAATGATGCACAAGCCAGAAGTAATGAAGAGAGTTCAAGAGGAGTTGGAAGTTGTAGTTGGTAATGATAACATGGTAGAAGAGTCCCACATTCATAAGTTGTCTTTCTTGCAAGCTGTGATGAAAGAAACTCTTCGATTGCACCCTGTGCTTCCACTTCTAATCCCTCATTGCCCCAGTGAAACCACCAATGTGGGAGGATACACAATCCCAAAGGGGTCTCGGGTGTTCGTGAATGTGTGGGCTATTCATAGGGATCCTTCCATTTGGGAGAACCCACTAGAATTTGATCCTGCAAGGTTCTTAGATGCAAAATGGGATTTCAGTGGCAATGACTACAATTATTTCCCCTTTGGATCCGGAAGAAGAATTTGTGCAGGAATAGCAATGGCTGAGAGGACGGTTTTGTATTTTGTTGCCACACTTATGCACTCATTTGATTGGACAATACCCCCAGGAGAAAATTTGGATGTATCAGAGAAATTTGGTATTATTCTCAAAAAGAAAATACCTCTTGTTGCCATCCCCAACCCACGGTTACCCAACCTAGATCTATATCTGTAA 678 0.4189 MILKNFMTNIVEILDEHKQDMVTGGTDTSSNTIEFAMAEMMHKPEVMKRVQEELEVVVGNDNMVEESHIHKLSFLQAVMKETLRLHPVLPLLIPHCPSETTNVGGYTIPKGSRVFVNVWAIHRDPSIWENPLEFDPARFLDAKWDFSGNDYNYFPFGSGRRICAGIAMAERTVLYFVATLMHSFDWTIPPGENLDVSEKFGIILKKKIPLVAIPNPRLPNLDLYL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01591 225 Gene3D Cytochrome P450 8 212 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 Pfam Cytochrome P450 20 206 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PANTHER OS08G0547900 PROTEIN 19 224 - -
Pumo4g01591 225 FunFam Putative cytochrome P450 superfamily protein 13 215 - -
Pumo4g01591 225 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 156 165 IPR017972 GO:0005506|GO:0016705
Pumo4g01591 225 PRINTS P450 superfamily signature 163 174 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PRINTS P450 superfamily signature 24 41 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PRINTS P450 superfamily signature 154 163 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PRINTS P450 superfamily signature 77 88 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 SUPERFAMILY Cytochrome P450 18 217 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PRINTS E-class P450 group I signature 13 30 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PRINTS E-class P450 group I signature 153 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PRINTS E-class P450 group I signature 117 141 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PRINTS E-class P450 group I signature 33 59 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PRINTS E-class P450 group I signature 76 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo4g01591 225 PRINTS E-class P450 group I signature 163 186 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01591 Pumo-Chr4 20168082 20168976 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01591 20 225 Cytochrome P450 AT4G12330 68.932 6.38e-104 308