Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01587 ATGGATGCTTTCCTTTTCATTCTTCTCACTTTCGTGTTGAGCATCCACATTCATTTTGCTCAAGGAAGTGAACTACCGCCTACCACAAGCAGTTCAAAAACATATATTATCCATGTGAAGGGGCCACATGTTAAGACACTAGATCAATCACAAGATTTAGAGAGCTGGTACCATTCATTCATGCCACCTACTATTATGAGCTCTGAGGAGCAGCCTCGAATAATTTATTCATACCGAAACGTGATGAGTGGTTTTGCTGCAAGACTCACTGAAGAAGAGCTGAGAGCTGTGGAAAAAAAGGATGGCTTTATCTCTGCTCGTCCCGAAAGAATGCTACATCGTCAAACCACACACACCCCTCAATTTTTGGGGTTGCAGCAACAATCGGGATTATGGAAAGAATCAAACTTTGGAAAGGGAATAATTATTGGGGTGCTGGATACTGGAATCACGCCTGATCATCCTTCATTCAATGATGCAGGAATGCCGCCACCACCACCCAAATGGAAAGGGAGATGCGAACTCAATGTGACAGCTTGCAACAACAAACTAATTGGAGCAAGGACTTTCAACCTTGCAGTGAAGGCAATGAAAGGAGCAGAGGCAGCAATTGATGAGGATGGACATGGGACTCACACAGCAAGCACAGCTGCTGGTGCTTTTGTTGATTATGCAGAAGTACTAGGAAATGCCAAAGGCACAGCAGCTGGGATTGCCCCTTATGCTCACCTGGCAATTTACAGAGTATGCTTTAAAGGCTGCCCTGAGAGTGATATATTGGCAGCATTGGATGCAGCTGTGGAGGATGGTGTGGATGTGTTATCAATATCCCTCGGCCTACATAAGCCGCCTCCTTTTTTCAATGATGGCACTGCTATAGGCACATTTGCAGCAATGCAGAAGGGAATCTTTGTAAGTTGTGCAGCAGGAAACTCTGGCCCATTCCCCGGCTCCTTAGTTAACGGAGCCCCTTGGATCCTCACAGTTGGAGCAAGCAATATTGACAGAAGCATTGTAGCAACAGCAAAGCTAGGAAACGGGCAAGAATTTGATGGTGAATCTTTTTTCCAGCCTTCCAATTTTACTCCAACACTGCTACCCTTAGCATACGCTGGAAAGAATGGCAAAGAAGAAGCTGCATTGTGTGCTAATGGATCCTTGAATGATGTTGATTTCAGAGGCAAGGTTGTTTTGTGTGAGAGAGGAGGAGATACAGGAAGAATTGCCAAAGGAGAAGAAGTAAAGAGAGCTGGTGGTGCAGCCATGATTCTCATGAATGATGAAAGCAATGGCTTTAGTCTCTCAGCTGATGTACATGTTCTGCCTGCAACACATGTAAGCTATGATGCTGGACTTAAGATTAAAGCCTATATAAATTCCACTGCAACACCTACAGCAACCATTTTATTCAAGGGAACTATAATGGGAAACTCCTTAGCTCCTGCTGTTACATCCTTCTCTTCAAGAGGTCCCAACTTGCCAAGTCCTGGTATTCTGAAACCAGACATCATAGGACCAGGTGTGAACATCCTAGCTGCCTGGCCATCCTCCCTGAATAACAATACCGATTCAAAATCCACTTTCAAAATTATGTCCGGTACATCAATGTCATGCCCACATCTTAGTGGCGTAGCTGCTTTGCTCAAAAGCTCTCATCCTCACTGGTCATCAGCTGCCATAAAATCTGCCATAATGACTTCTGCAGACATAATCAATCTTGAACAGAAACTCATTGTTGATGAAACACTTCACCCTGCAGATATCTTTGCCACAGGTTCTGGTCACGTGAATCCATCAAGAGCAAATGACCCCGGGTTAGTTTATGATATTGAGCCTGATGATTATATACCTTATCTGTGTGGTCTAGGCTACGGCGATACCGAAGTTGGGATCATTGCACACAAAACAATTAAGTGCTCTGAGACTTCAAGCATTCCCGAAGGAGAGCTCAACTATCCCTCATTTTCTGTTGTGCTTGGTTCCCCGCAGACATTCACAAGGACTGTGACAAATGTGGGTGAGGCCAACTCATCTTATGTTGTCATGGTTACGGCACCAGAAGGGGTTGATGTGAAGGTCCAACCAAATAAACTTTACTTTTCAGAAGCAAACCAGAAAGAGACATATTCAGTGTCATTCAGCCGTATAGAGTCGGGTAATGAAACTGCAAAATATGCTCAAGGGTTTTTACAATGGGTCTCTGCCAAACACACTGTAAGGAGCCCTATCTTGGTCAACTTTGTATAA 2247 0.4424 MDAFLFILLTFVLSIHIHFAQGSELPPTTSSSKTYIIHVKGPHVKTLDQSQDLESWYHSFMPPTIMSSEEQPRIIYSYRNVMSGFAARLTEEELRAVEKKDGFISARPERMLHRQTTHTPQFLGLQQQSGLWKESNFGKGIIIGVLDTGITPDHPSFNDAGMPPPPPKWKGRCELNVTACNNKLIGARTFNLAVKAMKGAEAAIDEDGHGTHTASTAAGAFVDYAEVLGNAKGTAAGIAPYAHLAIYRVCFKGCPESDILAALDAAVEDGVDVLSISLGLHKPPPFFNDGTAIGTFAAMQKGIFVSCAAGNSGPFPGSLVNGAPWILTVGASNIDRSIVATAKLGNGQEFDGESFFQPSNFTPTLLPLAYAGKNGKEEAALCANGSLNDVDFRGKVVLCERGGDTGRIAKGEEVKRAGGAAMILMNDESNGFSLSADVHVLPATHVSYDAGLKIKAYINSTATPTATILFKGTIMGNSLAPAVTSFSSRGPNLPSPGILKPDIIGPGVNILAAWPSSLNNNTDSKSTFKIMSGTSMSCPHLSGVAALLKSSHPHWSSAAIKSAIMTSADIINLEQKLIVDETLHPADIFATGSGHVNPSRANDPGLVYDIEPDDYIPYLCGLGYGDTEVGIIAHKTIKCSETSSIPEGELNYPSFSVVLGSPQTFTRTVTNVGEANSSYVVMVTAPEGVDVKVQPNKLYFSEANQKETYSVSFSRIESGNETAKYAQGFLQWVSAKHTVRSPILVNFV 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01587 748 Pfam Subtilase family 138 568 IPR000209 GO:0006508|GO:0008236
Pumo4g01587 748 Pfam PA domain 379 454 IPR003137 -
Pumo4g01587 748 Gene3D - 335 476 - -
Pumo4g01587 748 SUPERFAMILY PA domain 376 459 IPR046450 -
Pumo4g01587 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 114 IPR037045 -
Pumo4g01587 748 CDD Peptidases_S8_3 112 569 IPR034197 -
Pumo4g01587 748 Gene3D Peptidase S8/S53 domain 140 615 IPR036852 GO:0004252|GO:0006508
Pumo4g01587 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 744 IPR045051 -
Pumo4g01587 748 FunFam subtilisin-like protease SBT1.5 335 475 - -
Pumo4g01587 748 ProSiteProfiles Serine proteases, subtilase domain profile. 122 602 - -
Pumo4g01587 748 FunFam Subtilisin-like protease SBT1.5 140 377 - -
Pumo4g01587 748 SUPERFAMILY Subtilisin-like 115 606 IPR036852 GO:0004252|GO:0006508
Pumo4g01587 748 Gene3D - 619 747 - -
Pumo4g01587 748 Pfam Fibronectin type-III domain 649 745 IPR041469 -
Pumo4g01587 748 Pfam Peptidase inhibitor I9 34 112 IPR010259 -
Pumo4g01587 748 CDD PA_subtilisin_like 341 468 - -
Pumo4g01587 748 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 143 154 IPR023827 -
Pumo4g01587 748 PRINTS Subtilisin serine protease family (S8) signature 205 218 IPR015500 -
Pumo4g01587 748 PRINTS Subtilisin serine protease family (S8) signature 532 548 IPR015500 -
Pumo4g01587 748 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01587 Pumo-Chr4 20106954 20109388 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01587 33 747 Subtilisin-like Serine Gene Family AT1G04110 45.878 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01587 - - gmx:100812208 1328.92