Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01572 ATGCTGGATCAGGAGCATCATAAAGCGACTTCGTTAACGTTGAATGAGGATGCTGATACCGATACCGATACCGTGTTCGCTGCGCATGCCCCTAGCGTCACCACCTCTTCGGGTTGTGGCAGTGACAGTTGGGGAGACAGCGAATTCACTTTCGCATCCACCGTTGCTTCTTCCTCTGAGAGCTCCAACGAAAATTACCTACCTGAGCCTGAGGGTACCAAAGAGGATGCGCTCCATCATAAGATACAACAACTAGTAACCAAGGAATATTGGTCGAATGAGATTGAGAAGGAACAATTTAGTCCTGTATCGATACTAGATTGCCCATTTGAAGACGAAGAAGATATTTACAAGTCTCGATTCAATTCCACCTCCACTATTCTTTCCTTTTCTGAAGGAGTCAAACAGAAGCACATGCACAAAAGATGCCATTTGGAGCCGGTGGTTTTAGAGAAAAGGTTCGTGCGGTTAGAGCTGGAGGATGAACCACACAACCATTCCACAAAACAATGTTCCCCCGTATTAGTGCCAATAATGCGTACCCAAAACAAGTTGCGTCGTGACAGCAATCGCAACATCGAGGAGAATGCTCGCGATCTTCTCAACTTAGTTAAAAGGTCAATTACACCCAACAGTTTGATAACAAAGACAGAGAACCTGCTGTTTGATTTCTTCAAGCAGAGTGTTGGGGAAAACAAAGACATTGATCATTCAAAGAAGCTTCAACTTTGCAAGGTAGCCGAGGATTGGATACATGGGCAACCCCAAGAGTTGTATTTGGGTTGGGAAGTGAAGGGAGGAAGGTGCGTATACATTAGGGAGATGGATAAGTGTGGAGAGTGGAAAAACTCTGATCAAGAAATTCAACAATTGGCCATGGAACTGGCAAATGAGGTCTTCGCAAATTTGGTTGATGAGTTCGTAGTTGACCTCATGACACGTGCTAGCCACTAA 954 0.4486 MLDQEHHKATSLTLNEDADTDTDTVFAAHAPSVTTSSGCGSDSWGDSEFTFASTVASSSESSNENYLPEPEGTKEDALHHKIQQLVTKEYWSNEIEKEQFSPVSILDCPFEDEEDIYKSRFNSTSTILSFSEGVKQKHMHKRCHLEPVVLEKRFVRLELEDEPHNHSTKQCSPVLVPIMRTQNKLRRDSNRNIEENARDLLNLVKRSITPNSLITKTENLLFDFFKQSVGENKDIDHSKKLQLCKVAEDWIHGQPQELYLGWEVKGGRCVYIREMDKCGEWKNSDQEIQQLAMELANEVFANLVDEFVVDLMTRASH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01572 317 PANTHER OS04G0572500 PROTEIN 27 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01572 Pumo-Chr4 19841472 19845430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01572 96 312 TRM (TON1 Recruiting Motif) Superfamily AT4G11780 31.602 6.98e-20 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01572 - - gmx:102663212 448.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo4g01572 4 19841472 19845430 Pumo4g01572 4 19841472 19845430 ECH