Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo4g01565 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGGCACAGATTGAGGAGCGAAGCATCTGCACAGTTTCAAGCCTGCCACTTCCAGCTACCTTCCATGAGCACGCAGAGATTGGACTTGCCGTGCACCACCTTCACTCGCAAAGACACCTCTTCGCGCTCTCAGCCCCTAAGACCAGTGGGCCTCTCAGTGGAGAAACCCATCGAAGCCAAGACCAGCACCTGTTCTCTCAAGCACAACATTCGGCTCCCACCTTTAGCCATCACTGCAGCAGCACCATTGGTGGAAGAGTCCATCAAGGACAAGAGCTTGAAAAGGCTCGCGGAGCACGATGAGTCCTTCGCCAACATTGCCAAGAGGAAAAGGAGTAGCACTGAGTGTGATAACAACAACCACAACCACCTTTGGTTTCAGCCTGGTGTTGAGACTACTACTACTACTACTAATTTAGGAGGATTTAACAATAACAACACTTCACTTGTTTCTTTCTCTTCGGAGGAAGAGAGGGTTTGTTTTGTTCCTTCTGAAGTGGTGTCTCATTCTGCACCTTTGCCTCTGAACCCTTGGCTGGAATCATGTGTGACGAAGATCACCAATTTCGGTGAGGGCAGCCACTGTCCTCCTCACCATCCAAAAGAAGGGTCGGTCTCCAACGCTTCCTCGGAGAGCCAAAGCCTGAGGCTAAACGACAACGTATCGGAACACGAAGTGGGAAACGGTTCAGGGAACCCTTACCATCATCACCACGAGGTGGAGACAGGGGAAGAAGACGACCACCACGGGTTTGAACTCGTTAGCTTGCTCACCGGCTGCGTCGACGCCATTGGATCGAGAAACATCACTGCAATCAACCATTTCATAGCGAAATTGGGCGATTTAGCTTCTCCAAAAGGAACCTCCATAAGCCGTTTATGTGCTTACTTCACAGAAGCCTTGGCCATCAGAGTCACAAGGCTTTGGCCTCACGTTTTTCACATCACCACCACTTCTCGCGACATGGTGGACGATGATGAATCCGCCGCCACTGCTCTGAGACTTCTGAATCAAGTCACTCCAATTCCCAAGTTCCTTCATTTCACATCCAACGAGATGCTGCTGAGGGCCTTTGAAGGCAAAGACAGGGTTCACATAATAGACTTCGACATCAAGCAAGGGCTTCAGTGGCCTAGCTTGTTCCAGAGCCTAGCTTCGAGGTCAAACCCTCCGAGTCACGTGAGAATCACGGGGATAGGCGAGTCAAAACAGGATCTAAACGAAACGGGAGACAGGCTCGCCGGTTTCGCTGAAGCGCTGAACCTCCCCTTTGAGTTCCACCCCGTTGTGGACAGACTCGAGGACGTGAGGCTGTGGATGCTTCACGTGAAGGAGCACGAAACGGTGGCCGTGAACTGCGTTTTGCAGCTGCACAAGACGCTATACGACGGTAGCGGAGGAGCGTTGAGGGACTTCTTGGGTCTCATCCGCAGCACAAATCCCAGCATCGTCGTCGTGGCGGAACAAGAAGCACAGCACAATGAAGCCAGGTTGGAGGCAAGGGTGTGCAATTCGTTGAAGTACTATTCGGCATTGTTCGATTCCATTGACGAGAGTGGGCTTCCGCAAGAGAGTGCAGTGAGGGTGAAGATAGAGGAGATGTACGCCAAGGAGATAAGGAACATTGTTGCTTGCGAAGGAAGGGACAGGTTGGAGAGGCACGAGAGTTTCGGGAACTGGAGGAGGATGATGGTGGAGCAAGGAGGGTTCAGATGCATGGGTGTTACCGAAAGAGAAATGAGCCAGAGCCAGTTGCTGCTGAAGATGTATTCTTGTGAGAGTTACAGTGTGAAGAAACAGGAGAAGGAAGGAGCAACAGGAGTTACACTTAGTTGGTTGGACCAGCCTTTGTACACTGTCTCTGCTTGGGGGCCTGTTGATGTTGCGGGAACCTCGTCCTCTTTTTCTCAGCCAAGTTGA 1959 0.5145 MLAGCSSSTLLSPRHRLRSEASAQFQACHFQLPSMSTQRLDLPCTTFTRKDTSSRSQPLRPVGLSVEKPIEAKTSTCSLKHNIRLPPLAITAAAPLVEESIKDKSLKRLAEHDESFANIAKRKRSSTECDNNNHNHLWFQPGVETTTTTTNLGGFNNNNTSLVSFSSEEERVCFVPSEVVSHSAPLPLNPWLESCVTKITNFGEGSHCPPHHPKEGSVSNASSESQSLRLNDNVSEHEVGNGSGNPYHHHHEVETGEEDDHHGFELVSLLTGCVDAIGSRNITAINHFIAKLGDLASPKGTSISRLCAYFTEALAIRVTRLWPHVFHITTTSRDMVDDDESAATALRLLNQVTPIPKFLHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRSNPPSHVRITGIGESKQDLNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEHETVAVNCVLQLHKTLYDGSGGALRDFLGLIRSTNPSIVVVAEQEAQHNEARLEARVCNSLKYYSALFDSIDESGLPQESAVRVKIEEMYAKEIRNIVACEGRDRLERHESFGNWRRMMVEQGGFRCMGVTEREMSQSQLLLKMYSCESYSVKKQEKEGATGVTLSWLDQPLYTVSAWGPVDVAGTSSSFSQPS 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo4g01565 652 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 215 633 IPR005202 -
Pumo4g01565 652 Pfam GRAS domain family 266 636 IPR005202 -
Pumo4g01565 652 ProSiteProfiles GRAS family profile. 257 637 IPR005202 -
Pumo4g01565 652 MobiDBLite consensus disorder prediction 216 240 - -
Pumo4g01565 652 MobiDBLite consensus disorder prediction 206 260 - -
Pumo4g01565 652 MobiDBLite consensus disorder prediction 243 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo4g01565 Pumo-Chr4 19719827 19723001 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo4g01565 1 636 GRAS Transcription Factor Family AT1G63100 56.094 0.0 658
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo4g01565 GRAS 5.5e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo4g01565 - - gmx:100786173 1079.32